PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Family-Level Assignments
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
MCI27820.1[Trifolium Rosmarinic Acid C4H low borderline
MCI29357.1[Trifolium Rosmarinic Acid C4H medium pass
MCI29677.1[Trifolium Rosmarinic Acid C4H medium pass
MCI29991.1[Trifolium Rosmarinic Acid C4H low borderline
MCI30067.1[Trifolium Rosmarinic Acid C4H low borderline
MCI30171.1[Trifolium Rosmarinic Acid C4H low borderline
MCI30787.1[Trifolium Rosmarinic Acid C4H low borderline
MCI30875.1[Trifolium Rosmarinic Acid C4H low borderline
MCI31313.1[Trifolium Rosmarinic Acid C4H medium pass
MCI33410.1[Trifolium Rosmarinic Acid C4H low borderline
MCI34127.1[Trifolium Rosmarinic Acid C4H low borderline
MCI34692.1[Trifolium Rosmarinic Acid C4H low borderline
MCI36247.1[Trifolium Rosmarinic Acid C4H low borderline
MCI36636.1[Trifolium Rosmarinic Acid C4H low borderline
MCI36764.1[Trifolium Rosmarinic Acid C4H low borderline
MCI37579.1[Trifolium Rosmarinic Acid C4H low borderline
MCI41438.1[Trifolium Rosmarinic Acid C4H low borderline
MCI43793.1[Trifolium Rosmarinic Acid C4H low borderline
MCI46382.1[Trifolium Rosmarinic Acid C4H medium pass
MCI47105.1[Trifolium Rosmarinic Acid C4H medium pass
MCI50644.1[Trifolium Rosmarinic Acid C4H low borderline
MCI53444.1[Trifolium Rosmarinic Acid C4H medium pass
MCI55851.1[Trifolium Rosmarinic Acid C4H low borderline
MCI56004.1[Trifolium Rosmarinic Acid C4H low borderline
MCI57189.1[Trifolium Rosmarinic Acid C4H medium pass
MCI57977.1[Trifolium Rosmarinic Acid C4H low borderline
MCI69400.1[Trifolium Rosmarinic Acid C4H medium pass
MCI72952.1[Trifolium Rosmarinic Acid C4H low borderline
MCI73280.1[Trifolium Rosmarinic Acid C4H medium pass
MCI73595.1[Trifolium Rosmarinic Acid C4H low borderline
MCI97498.1[Trifolium Rosmarinic Acid C4H low borderline
MCH95235.1[Trifolium Rosmarinic Acid CPR medium pass
MCH96288.1[Trifolium Rosmarinic Acid CPR medium pass
MCH97386.1[Trifolium Rosmarinic Acid CPR low borderline
MCI05164.1[Trifolium Rosmarinic Acid CPR medium pass
MCI08751.1[Trifolium Rosmarinic Acid CPR medium pass
MCI10867.1[Trifolium Rosmarinic Acid CPR medium pass
MCI15339.1[Trifolium Rosmarinic Acid CPR medium pass
MCI15807.1[Trifolium Rosmarinic Acid CPR medium pass
MCI23890.1[Trifolium Rosmarinic Acid CPR medium pass
MCI48873.1[Trifolium Rosmarinic Acid CPR medium pass
MCI49063.1[Trifolium Rosmarinic Acid CPR low borderline
MCH96562.1[Trifolium Rosmarinic Acid HPPR low borderline
MCI17223.1[Trifolium Rosmarinic Acid HPPR medium pass
MCI24054.1[Trifolium Rosmarinic Acid HPPR medium pass
MCI33250.1[Trifolium Rosmarinic Acid HPPR medium pass
MCI47747.1[Trifolium Rosmarinic Acid HPPR medium pass
MCI77004.1[Trifolium Rosmarinic Acid HPPR low borderline
MCI91411.1[Trifolium Rosmarinic Acid HPPR medium pass
MCH86172.1[Trifolium Rosmarinic Acid PAL high pass