PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
MCI06404.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI06797.1[Trifolium Flavonoid F3'H/CYP75B low borderline
MCI08682.1[Trifolium Flavonoid F3'H/CYP75B low borderline
MCI09194.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI11111.1[Trifolium Flavonoid F3'H/CYP75B low borderline
MCI12629.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI13558.1[Trifolium Flavonoid F3'H/CYP75B medium pass
MCI14302.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI14488.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI14679.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI16229.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI19209.1[Trifolium Flavonoid F3'H/CYP75B low borderline
MCI19302.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI21414.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI23723.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI23871.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI24448.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI24933.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI25155.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI26667.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI26700.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI27590.1[Trifolium Flavonoid F3'H/CYP75B low borderline
MCI29584.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI29677.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI30171.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI30787.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI33410.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI36764.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI55375.1[Trifolium Flavonoid F3'H/CYP75B low borderline
MCI55851.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI56004.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCI76673.1[Trifolium Flavonoid F3'H/CYP75B medium borderline
MCH80282.1[Trifolium Flavonoid F3H low borderline
MCH80725.1[Trifolium Flavonoid F3H low borderline
MCH81069.1[Trifolium Flavonoid F3H medium borderline
MCH82507.1[Trifolium Flavonoid F3H low borderline
MCH83522.1[Trifolium Flavonoid F3H medium borderline
MCH86221.1[Trifolium Flavonoid F3H medium borderline
MCH87466.1[Trifolium Flavonoid F3H low borderline
MCH87477.1[Trifolium Flavonoid F3H low borderline
MCH88557.1[Trifolium Flavonoid F3H medium borderline
MCH88611.1[Trifolium Flavonoid F3H low borderline
MCH89135.1[Trifolium Flavonoid F3H medium borderline
MCH89519.1[Trifolium Flavonoid F3H medium borderline
MCH89632.1[Trifolium Flavonoid F3H medium borderline
MCH91129.1[Trifolium Flavonoid F3H medium borderline
MCH91842.1[Trifolium Flavonoid F3H low borderline
MCH93550.1[Trifolium Flavonoid F3H medium borderline
MCH93965.1[Trifolium Flavonoid F3H medium borderline
MCH94178.1[Trifolium Flavonoid F3H low borderline