PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
MCH98341.1[Trifolium Terpenoid DXR medium pass
MCH98754.1[Trifolium Terpenoid DXR low borderline
MCI07559.1[Trifolium Terpenoid DXR low borderline
MCI10337.1[Trifolium Terpenoid DXR medium pass
MCI16059.1[Trifolium Terpenoid DXR medium pass
MCI17731.1[Trifolium Terpenoid DXR medium pass
MCI46533.1[Trifolium Terpenoid DXR medium pass
MCI48629.1[Trifolium Terpenoid DXR medium pass
MCI61633.1[Trifolium Terpenoid DXR low borderline
MCI64554.1[Trifolium Terpenoid DXR medium pass
MCH80299.1[Trifolium Terpenoid DXS medium pass
MCI08956.1[Trifolium Terpenoid DXS medium pass
MCI09870.1[Trifolium Terpenoid DXS medium pass
MCI11225.1[Trifolium Terpenoid DXS medium pass
MCI11395.1[Trifolium Terpenoid DXS medium pass
MCI11473.1[Trifolium Terpenoid DXS medium pass
MCI11503.1[Trifolium Terpenoid DXS medium pass
MCI12286.1[Trifolium Terpenoid DXS medium pass
MCI23686.1[Trifolium Terpenoid DXS medium pass
MCI25415.1[Trifolium Terpenoid DXS medium pass
MCI36625.1[Trifolium Terpenoid DXS medium pass
MCI42127.1[Trifolium Terpenoid DXS medium pass
MCI42518.1[Trifolium Terpenoid DXS medium pass
MCI56038.1[Trifolium Terpenoid DXS medium pass
MCI64486.1[Trifolium Terpenoid DXS medium pass
MCI64792.1[Trifolium Terpenoid DXS medium pass
MCI70906.1[Trifolium Terpenoid DXS medium pass
MCH85807.1[Trifolium Terpenoid FPPS medium pass
MCH94939.1[Trifolium Terpenoid FPPS low borderline
MCI12192.1[Trifolium Terpenoid FPPS medium pass
MCI14685.1[Trifolium Terpenoid FPPS medium pass
MCI19026.1[Trifolium Terpenoid FPPS medium pass
MCI19625.1[Trifolium Terpenoid FPPS medium borderline
MCI51903.1[Trifolium Terpenoid FPPS low borderline
MCI83199.1[Trifolium Terpenoid FPPS low borderline
MCI93569.1[Trifolium Terpenoid FPPS medium pass
MCH95501.1[Trifolium Terpenoid GGPPS medium borderline
MCI15849.1[Trifolium Terpenoid GGPPS medium borderline
MCI19201.1[Trifolium Terpenoid GGPPS medium borderline
MCI20213.1[Trifolium Terpenoid GGPPS medium borderline
MCI21119.1[Trifolium Terpenoid GGPPS medium borderline
MCH85791.1[Trifolium Terpenoid GPPS medium pass
MCH95083.1[Trifolium Terpenoid GPPS medium borderline
MCI01660.1[Trifolium Terpenoid HDS/IspG medium pass
MCI07591.1[Trifolium Terpenoid HDS/IspG medium pass
MCI13014.1[Trifolium Terpenoid HDS/IspG medium pass
MCI14827.1[Trifolium Terpenoid HDS/IspG medium pass
MCI23766.1[Trifolium Terpenoid HDS/IspG medium pass
MCI48156.1[Trifolium Terpenoid HDS/IspG medium pass
MCH84801.1[Trifolium Terpenoid HMGR medium pass