PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
MCI13636.1[Trifolium Phenylpropanoid CSE medium pass
MCI15874.1[Trifolium Phenylpropanoid CSE medium pass
MCI16394.1[Trifolium Phenylpropanoid CSE medium pass
MCI18081.1[Trifolium Phenylpropanoid CSE medium pass
MCI30312.1[Trifolium Phenylpropanoid CSE medium pass
MCI33976.1[Trifolium Phenylpropanoid CSE medium pass
MCI39835.1[Trifolium Phenylpropanoid CSE medium pass
MCI40758.1[Trifolium Phenylpropanoid CSE medium pass
MCI41025.1[Trifolium Phenylpropanoid CSE medium pass
MCI45678.1[Trifolium Phenylpropanoid CSE medium pass
MCI52656.1[Trifolium Phenylpropanoid CSE low borderline
MCI54395.1[Trifolium Phenylpropanoid CSE medium pass
MCI77967.1[Trifolium Phenylpropanoid CSE medium pass
MCH81900.1[Trifolium Phenylpropanoid F5H/CYP84A medium borderline
MCH92120.1[Trifolium Phenylpropanoid F5H/CYP84A medium borderline
MCH93922.1[Trifolium Phenylpropanoid F5H/CYP84A medium borderline
MCH97295.1[Trifolium Phenylpropanoid F5H/CYP84A medium borderline
MCI02858.1[Trifolium Phenylpropanoid F5H/CYP84A medium borderline
MCI15256.1[Trifolium Phenylpropanoid F5H/CYP84A medium borderline
MCI16069.1[Trifolium Phenylpropanoid F5H/CYP84A medium borderline
MCI22248.1[Trifolium Phenylpropanoid F5H/CYP84A medium borderline
MCI25155.1[Trifolium Phenylpropanoid F5H/CYP84A medium borderline
MCI29677.1[Trifolium Phenylpropanoid F5H/CYP84A medium borderline
MCI36764.1[Trifolium Phenylpropanoid F5H/CYP84A medium borderline
MCI61993.1[Trifolium Phenylpropanoid F5H/CYP84A medium pass
MCH79572.1[Trifolium Phenylpropanoid HCT low borderline
MCH82035.1[Trifolium Phenylpropanoid HCT low borderline
MCH91260.1[Trifolium Phenylpropanoid HCT low borderline
MCH94301.1[Trifolium Phenylpropanoid HCT medium pass
MCH96096.1[Trifolium Phenylpropanoid HCT medium pass
MCH96627.1[Trifolium Phenylpropanoid HCT medium pass
MCI02753.1[Trifolium Phenylpropanoid HCT low borderline
MCI04759.1[Trifolium Phenylpropanoid HCT medium pass
MCI05742.1[Trifolium Phenylpropanoid HCT low borderline
MCI13401.1[Trifolium Phenylpropanoid HCT medium pass
MCI19413.1[Trifolium Phenylpropanoid HCT low borderline
MCI21671.1[Trifolium Phenylpropanoid HCT medium pass
MCI23017.1[Trifolium Phenylpropanoid HCT medium pass
MCI32517.1[Trifolium Phenylpropanoid HCT low borderline
MCI32579.1[Trifolium Phenylpropanoid HCT medium pass
MCI44344.1[Trifolium Phenylpropanoid HCT medium pass
MCI49002.1[Trifolium Phenylpropanoid HCT medium pass
MCI92313.1[Trifolium Phenylpropanoid HCT low borderline
MCH80325.1[Trifolium Phenylpropanoid LAC medium pass
MCH83202.1[Trifolium Phenylpropanoid LAC medium pass
MCH87515.1[Trifolium Phenylpropanoid LAC medium pass
MCH90823.1[Trifolium Phenylpropanoid LAC medium pass
MCH93698.1[Trifolium Phenylpropanoid LAC medium pass
MCH95417.1[Trifolium Phenylpropanoid LAC medium pass
MCH95599.1[Trifolium Phenylpropanoid LAC medium pass