PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
MCI36247.1[Trifolium Alkaloid IO medium borderline
MCI49330.1[Trifolium Alkaloid IO low borderline
MCI56004.1[Trifolium Alkaloid IO medium borderline
MCI57660.1[Trifolium Alkaloid IO medium borderline
MCI58185.1[Trifolium Alkaloid IO medium borderline
MCI66777.1[Trifolium Alkaloid IO low borderline
MCI81995.1[Trifolium Alkaloid IO low borderline
MCH98872.1[Trifolium Alkaloid ISY medium pass
MCI02234.1[Trifolium Alkaloid ISY medium pass
MCI08066.1[Trifolium Alkaloid ISY low borderline
MCI17986.1[Trifolium Alkaloid ISY medium pass
MCI23403.1[Trifolium Alkaloid ISY medium pass
MCI43219.1[Trifolium Alkaloid ISY low borderline
MCI55873.1[Trifolium Alkaloid ISY medium pass
MCI56890.1[Trifolium Alkaloid ISY medium pass
MCI58525.1[Trifolium Alkaloid ISY medium pass
MCI62640.1[Trifolium Alkaloid ISY medium pass
MCI66356.1[Trifolium Alkaloid ISY medium pass
MCI78689.1[Trifolium Alkaloid ISY medium pass
MCI87619.1[Trifolium Alkaloid ISY medium pass
MCH89983.1[Trifolium Alkaloid LAMT medium borderline
MCH91101.1[Trifolium Alkaloid LAMT low borderline
MCI00712.1[Trifolium Alkaloid LAMT low borderline
MCI15593.1[Trifolium Alkaloid LAMT medium pass
MCI30817.1[Trifolium Alkaloid LAMT low borderline
MCI50873.1[Trifolium Alkaloid LAMT low borderline
MCH83429.1[Trifolium Alkaloid MPO low borderline
MCH84352.1[Trifolium Alkaloid MPO medium pass
MCH85214.1[Trifolium Alkaloid MPO high pass
MCH87372.1[Trifolium Alkaloid MPO medium pass
MCH92966.1[Trifolium Alkaloid MPO medium pass
MCH94725.1[Trifolium Alkaloid MPO medium pass
MCH98234.1[Trifolium Alkaloid MPO medium pass
MCH99055.1[Trifolium Alkaloid MPO medium pass
MCI05150.1[Trifolium Alkaloid MPO low borderline
MCI08931.1[Trifolium Alkaloid MPO low borderline
MCI19864.1[Trifolium Alkaloid MPO medium pass
MCI21213.1[Trifolium Alkaloid MPO low borderline
MCI23532.1[Trifolium Alkaloid MPO low borderline
MCI40148.1[Trifolium Alkaloid MPO low borderline
MCI80505.1[Trifolium Alkaloid MPO medium pass
MCH80282.1[Trifolium Alkaloid NCS medium borderline
MCH81069.1[Trifolium Alkaloid NCS medium borderline
MCH98218.1[Trifolium Alkaloid NCS medium borderline
MCH98254.1[Trifolium Alkaloid NCS medium borderline
MCH99881.1[Trifolium Alkaloid NCS medium pass
MCI05523.1[Trifolium Alkaloid NCS low borderline
MCI06528.1[Trifolium Alkaloid NCS medium pass
MCI10064.1[Trifolium Alkaloid NCS medium pass
MCI10397.1[Trifolium Alkaloid NCS medium borderline