PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
BceiScaffold2310207770 Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
BceiScaffold2430216330 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BceiScaffold2460220130 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
BceiScaffold2460220160 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BceiScaffold2470221460 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
BceiScaffold250225200 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
BceiScaffold2710257600 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BceiScaffold2710257620 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BceiScaffold2710257630 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BceiScaffold2910270270 Rosmarinic Acid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
BceiScaffold2910270280 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
BceiScaffold30280350 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
BceiScaffold30280360 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
BceiScaffold3240296340 Rosmarinic Acid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
BceiScaffold3290299040 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
BceiScaffold3600313530 Rosmarinic Acid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
BceiScaffold3850326450 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
BceiScaffold3850326820 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
BceiScaffold4010346380 Rosmarinic Acid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
BceiScaffold40332260 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
BceiScaffold40332270 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
BceiScaffold40339260 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
BceiScaffold40339650 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BceiScaffold4070348140 Rosmarinic Acid 4CL low borderline 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
BceiScaffold4120352310 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
BceiScaffold4400368690 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BceiScaffold4540373330 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
BceiScaffold4670376960 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
BceiScaffold480382180 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
BceiScaffold5000399330 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
BceiScaffold5000399350 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
BceiScaffold5150407050 Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
BceiScaffold590429050 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
BceiScaffold640441680 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
BceiScaffold640445690 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
BceiScaffold650451860 Rosmarinic Acid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
BceiScaffold650451870 Rosmarinic Acid 4CL medium pass 4CL__00006__sp_P17814_4CL1_ORYSJ
BceiScaffold710464990 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BceiScaffold710465550 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
BceiScaffold80495480 Rosmarinic Acid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
BceiScaffold80497820 Rosmarinic Acid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
BceiScaffold890512990 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
BceiScaffold890514210 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
BceiScaffold890518210 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
BceiScaffold9750526250 Rosmarinic Acid 4CL medium pass 4CL__00017__sp_Q9S725_4CL2_ARATH