PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
BceiScaffold1560113240 Alkaloid 7DLGT low borderline
BceiScaffold1630117020 Alkaloid 7DLGT medium pass
BceiScaffold1680127030 Alkaloid 7DLGT low borderline
BceiScaffold1680127050 Alkaloid 7DLGT low borderline
BceiScaffold1690130380 Alkaloid 7DLGT low borderline
BceiScaffold1690130390 Alkaloid 7DLGT low borderline
BceiScaffold1690130400 Alkaloid 7DLGT low borderline
BceiScaffold1700133950 Alkaloid 7DLGT low borderline
BceiScaffold1700134050 Alkaloid 7DLGT low borderline
BceiScaffold1730135260 Alkaloid 7DLGT medium pass
BceiScaffold1740136390 Alkaloid 7DLGT medium pass
BceiScaffold1740136620 Alkaloid 7DLGT low borderline
BceiScaffold1740136630 Alkaloid 7DLGT low borderline
BceiScaffold1740136670 Alkaloid 7DLGT low borderline
BceiScaffold1740137810 Alkaloid 7DLGT medium pass
BceiScaffold1810142410 Alkaloid 7DLGT low borderline
BceiScaffold1820145010 Alkaloid 7DLGT low borderline
BceiScaffold1870147320 Alkaloid 7DLGT low borderline
BceiScaffold1890149420 Alkaloid 7DLGT low borderline
BceiScaffold18980152630 Alkaloid 7DLGT low borderline
BceiScaffold1920154140 Alkaloid 7DLGT low borderline
BceiScaffold1960157130 Alkaloid 7DLGT low borderline
BceiScaffold1960157150 Alkaloid 7DLGT low borderline
BceiScaffold1960157970 Alkaloid 7DLGT medium pass
BceiScaffold1960157990 Alkaloid 7DLGT medium pass
BceiScaffold1960158010 Alkaloid 7DLGT medium pass
BceiScaffold1960158040 Alkaloid 7DLGT medium pass
BceiScaffold2200180210 Alkaloid 7DLGT medium pass
BceiScaffold2230191340 Alkaloid 7DLGT low borderline
BceiScaffold2230191350 Alkaloid 7DLGT medium pass
BceiScaffold2230195640 Alkaloid 7DLGT medium pass
BceiScaffold2260199190 Alkaloid 7DLGT low borderline
BceiScaffold2310207710 Alkaloid 7DLGT low borderline
BceiScaffold23510209810 Alkaloid 7DLGT low borderline
BceiScaffold2360209910 Alkaloid 7DLGT low borderline
BceiScaffold2360209930 Alkaloid 7DLGT low borderline
BceiScaffold23750210370 Alkaloid 7DLGT medium pass
BceiScaffold24460217120 Alkaloid 7DLGT medium pass
BceiScaffold2460217820 Alkaloid 7DLGT high pass
BceiScaffold250225270 Alkaloid 7DLGT medium pass
BceiScaffold250227940 Alkaloid 7DLGT low borderline
BceiScaffold250227950 Alkaloid 7DLGT low borderline
BceiScaffold25060233010 Alkaloid 7DLGT low borderline
BceiScaffold25060233020 Alkaloid 7DLGT medium pass
BceiScaffold25110233200 Alkaloid 7DLGT low borderline
BceiScaffold2580240930 Alkaloid 7DLGT medium pass
BceiScaffold2580247780 Alkaloid 7DLGT low borderline
BceiScaffold2760260370 Alkaloid 7DLGT low borderline
BceiScaffold2850267870 Alkaloid 7DLGT low borderline
BceiScaffold2850267880 Alkaloid 7DLGT low borderline