PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
BceiScaffold23650209990 Rosmarinic Acid C4H low borderline
BceiScaffold23650210000 Rosmarinic Acid C4H low borderline
BceiScaffold23870210900 Rosmarinic Acid C4H medium pass
BceiScaffold23870210910 Rosmarinic Acid C4H low borderline
BceiScaffold2410214880 Rosmarinic Acid C4H low borderline
BceiScaffold2420215110 Rosmarinic Acid C4H low borderline
BceiScaffold24310216650 Rosmarinic Acid C4H low borderline
BceiScaffold24310216680 Rosmarinic Acid C4H low borderline
BceiScaffold2460218650 Rosmarinic Acid C4H low borderline
BceiScaffold2460218670 Rosmarinic Acid C4H medium pass
BceiScaffold2460218700 Rosmarinic Acid C4H low borderline
BceiScaffold2490222680 Rosmarinic Acid C4H low borderline
BceiScaffold250224430 Rosmarinic Acid C4H medium pass
BceiScaffold250224440 Rosmarinic Acid C4H low borderline
BceiScaffold250227090 Rosmarinic Acid C4H low borderline
BceiScaffold250228960 Rosmarinic Acid C4H low borderline
BceiScaffold25070233100 Rosmarinic Acid C4H medium pass
BceiScaffold2580239200 Rosmarinic Acid C4H low borderline
BceiScaffold2580239210 Rosmarinic Acid C4H low borderline
BceiScaffold2580239220 Rosmarinic Acid C4H low borderline
BceiScaffold2580241600 Rosmarinic Acid C4H low borderline
BceiScaffold2580247740 Rosmarinic Acid C4H low borderline
BceiScaffold2580247750 Rosmarinic Acid C4H low borderline
BceiScaffold25920248190 Rosmarinic Acid C4H low borderline
BceiScaffold26580255010 Rosmarinic Acid C4H low borderline
BceiScaffold26580255020 Rosmarinic Acid C4H low borderline
BceiScaffold26580255040 Rosmarinic Acid C4H low borderline
BceiScaffold26580255060 Rosmarinic Acid C4H low borderline
BceiScaffold26580255070 Rosmarinic Acid C4H low borderline
BceiScaffold26580255080 Rosmarinic Acid C4H low borderline
BceiScaffold26580255090 Rosmarinic Acid C4H medium pass
BceiScaffold26620255250 Rosmarinic Acid C4H low borderline
BceiScaffold2700256860 Rosmarinic Acid C4H medium pass
BceiScaffold2750259760 Rosmarinic Acid C4H low borderline
BceiScaffold2750259780 Rosmarinic Acid C4H low borderline
BceiScaffold280261430 Rosmarinic Acid C4H low borderline
BceiScaffold2830264200 Rosmarinic Acid C4H low borderline
BceiScaffold2830265410 Rosmarinic Acid C4H low borderline
BceiScaffold2840267810 Rosmarinic Acid C4H low borderline
BceiScaffold2850268180 Rosmarinic Acid C4H low borderline
BceiScaffold2850268190 Rosmarinic Acid C4H low borderline
BceiScaffold2930271670 Rosmarinic Acid C4H low borderline
BceiScaffold2930271680 Rosmarinic Acid C4H medium pass
BceiScaffold2930272250 Rosmarinic Acid C4H low borderline
BceiScaffold2950272520 Rosmarinic Acid C4H low borderline
BceiScaffold2950272550 Rosmarinic Acid C4H low borderline
BceiScaffold2950272570 Rosmarinic Acid C4H low borderline
BceiScaffold30275040 Rosmarinic Acid C4H low borderline
BceiScaffold30275350 Rosmarinic Acid C4H low borderline
BceiScaffold30276000 Rosmarinic Acid C4H low borderline