PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2991
Candidate Protein Records
2549
Pathway-Level Records
6334
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
BceiScaffold540415670 Rosmarinic Acid C4H low borderline
BceiScaffold5470417220 Rosmarinic Acid C4H low borderline
BceiScaffold560418330 Rosmarinic Acid C4H medium pass
BceiScaffold5650418720 Rosmarinic Acid C4H medium pass
BceiScaffold5660418740 Rosmarinic Acid C4H low borderline
BceiScaffold5660418750 Rosmarinic Acid C4H low borderline
BceiScaffold570421530 Rosmarinic Acid C4H low borderline
BceiScaffold570423460 Rosmarinic Acid C4H low borderline
BceiScaffold590426800 Rosmarinic Acid C4H low borderline
BceiScaffold590427260 Rosmarinic Acid C4H medium pass
BceiScaffold590429450 Rosmarinic Acid C4H low borderline
BceiScaffold600433540 Rosmarinic Acid C4H medium pass
BceiScaffold600433550 Rosmarinic Acid C4H medium pass
BceiScaffold600434840 Rosmarinic Acid C4H low borderline
BceiScaffold600434850 Rosmarinic Acid C4H low borderline
BceiScaffold600434880 Rosmarinic Acid C4H low borderline
BceiScaffold600435470 Rosmarinic Acid C4H low borderline
BceiScaffold600435970 Rosmarinic Acid C4H low borderline
BceiScaffold600436110 Rosmarinic Acid C4H medium pass
BceiScaffold630439740 Rosmarinic Acid C4H low borderline
BceiScaffold630439750 Rosmarinic Acid C4H low borderline
BceiScaffold630439770 Rosmarinic Acid C4H low borderline
BceiScaffold630439780 Rosmarinic Acid C4H low borderline
BceiScaffold630439810 Rosmarinic Acid C4H medium pass
BceiScaffold630439820 Rosmarinic Acid C4H low borderline
BceiScaffold630439840 Rosmarinic Acid C4H medium pass
BceiScaffold630439850 Rosmarinic Acid C4H medium pass
BceiScaffold630439860 Rosmarinic Acid C4H low borderline
BceiScaffold630440510 Rosmarinic Acid C4H low borderline
BceiScaffold640442450 Rosmarinic Acid C4H low borderline
BceiScaffold640443620 Rosmarinic Acid C4H low borderline
BceiScaffold640443630 Rosmarinic Acid C4H medium pass
BceiScaffold640443650 Rosmarinic Acid C4H low borderline
BceiScaffold640446100 Rosmarinic Acid C4H low borderline
BceiScaffold640448350 Rosmarinic Acid C4H low borderline
BceiScaffold640449330 Rosmarinic Acid C4H medium pass
BceiScaffold640449340 Rosmarinic Acid C4H medium pass
BceiScaffold650451950 Rosmarinic Acid C4H low borderline
BceiScaffold660456750 Rosmarinic Acid C4H low borderline
BceiScaffold660459860 Rosmarinic Acid C4H low borderline
BceiScaffold6740461090 Rosmarinic Acid C4H low borderline
BceiScaffold700462880 Rosmarinic Acid C4H low borderline
BceiScaffold710463550 Rosmarinic Acid C4H low borderline
BceiScaffold710463710 Rosmarinic Acid C4H low borderline
BceiScaffold710464080 Rosmarinic Acid C4H low borderline
BceiScaffold720470440 Rosmarinic Acid C4H low borderline
BceiScaffold720472850 Rosmarinic Acid C4H medium pass
BceiScaffold740476960 Rosmarinic Acid C4H low borderline
BceiScaffold7590484540 Rosmarinic Acid C4H medium pass
BceiScaffold7590484550 Rosmarinic Acid C4H medium pass