Bombax ceiba (bombax_ceiba)
Imported from atlas release summary for Bombax ceiba.
2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2549
Candidate Genes
C4H
6.66%
C3'H/CYP98A
6.06%
BAHD
5.35%
UGT
4.12%
CYP76
3.96%
IFS
3.8%
7DLGT
3.43%
F3H
3.41%
Other Families
63.2%
More Families (96)
T3O
210
3.32%
UFGT
209
3.3%
POD
208
3.28%
4CL
195
3.08%
DWF4/CYP90B1
170
2.68%
NMT
142
2.24%
CODM/T6ODM
131
2.07%
BR6OX2/CYP85A2
122
1.93%
F3'H/CYP75B
111
1.75%
STR
104
1.64%
H6H
100
1.58%
CAD
96
1.52%
LAC
84
1.33%
CYP71
83
1.31%
CAS
80
1.26%
TPS
77
1.22%
HCT
70
1.11%
SMT1/SMT2/SMT3
70
1.11%
GES
67
1.06%
CSE
66
1.04%
TRI/TRII
65
1.03%
BBE
65
1.03%
T16H
62
0.98%
CYP90D1
59
0.93%
F3'5'H/CYP75A
56
0.88%
G8O/G8H
54
0.85%
COMT
54
0.85%
RAS
50
0.79%
IO
49
0.77%
PYKS
48
0.76%
IFR
48
0.76%
PAL
48
0.76%
7DLH
45
0.71%
GS
44
0.69%
FNS
42
0.66%
F5H/CYP84A
38
0.6%
TAT
35
0.55%
PMT
34
0.54%
NCS
34
0.54%
ANR
34
0.54%
CPD/CYP90A1
34
0.54%
16OMT
32
0.51%
CCR
32
0.51%
ANS/LDOX
30
0.47%
LAMT
28
0.44%
SLS
24
0.38%
SGD
24
0.38%
BR6OX1/CYP85A1
24
0.38%
COR
23
0.36%
GGPPS
23
0.36%
SQE
22
0.35%
DFR
19
0.3%
CYP719
18
0.28%
CCoAOMT
18
0.28%
CYP51G1
17
0.27%
FPPS
17
0.27%
8HGO
16
0.25%
CHS
16
0.25%
CYP80B1
15
0.24%
MPO
13
0.21%
TYDC_DDC
12
0.19%
CPR
12
0.19%
CNMT
11
0.17%
HPPR
11
0.17%
ROT3/CYP90C1
11
0.17%
AACT
11
0.17%
ODC
9
0.14%
SMO1/SMO2
9
0.14%
HMGR
9
0.14%
TDC
8
0.13%
SQS/FDFT1
8
0.13%
CHI
7
0.11%
DXS
7
0.11%
ADC
6
0.09%
HDR/IspH
6
0.09%
ISY
5
0.08%
MVK
5
0.08%
MVD
5
0.08%
HMGS
5
0.08%
DET2
4
0.06%
DWF7
4
0.06%
HDS/IspG
4
0.06%
IDI
4
0.06%
MDS/IspF
4
0.06%
FK
3
0.05%
MCT/IspD
3
0.05%
DXR
3
0.05%
PMK
3
0.05%
DWF1
2
0.03%
GPPS
2
0.03%
XMT_MXMT_DXMT
1
0.02%
FLS
1
0.02%
HYD1
1
0.02%
CPI1
1
0.02%
DWF5
1
0.02%
CMK/IspE
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 774 | 21 | BAHD (273) | View species results |
| Phenylpropanoid pathway | 551 | 11 | POD (204) | View species results |
| Alkaloid pathway | 541 | 24 | 7DLGT (105) | View species results |
| Flavonoid pathway | 313 | 13 | UFGT (186) | View species results |
| Rosmarinic acid pathway | 212 | 7 | C4H (83) | View species results |
| Steroid pathway | 158 | 12 | CAS (71) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2500 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 459 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| BceiScaffold3990331770 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| BceiScaffold3990331780 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| BceiScaffold3990331790 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| BceiScaffold4010345300 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| BceiScaffold4010345340 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| BceiScaffold40334750 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold40334770 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold40334780 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold40334790 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold40334800 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold40334810 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold40334820 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold40334830 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold40336050 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| BceiScaffold40336070 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| BceiScaffold40336130 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| BceiScaffold410349480 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| BceiScaffold4120352630 | Terpenoid | CYP76 | medium | pass | CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI |
| BceiScaffold4120352640 | Terpenoid | CYP76 | low | borderline | CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ |
| BceiScaffold4120353590 | Terpenoid | CYP76 | medium | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| BceiScaffold4120353600 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| BceiScaffold4160356550 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| BceiScaffold4310364900 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| BceiScaffold4310364910 | Terpenoid | CYP76 | low | borderline | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| BceiScaffold4310364920 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| BceiScaffold4310364940 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| BceiScaffold4310364970 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| BceiScaffold4310365150 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold4500371590 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold4540373040 | Terpenoid | CYP76 | low | borderline | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| BceiScaffold4700379660 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| BceiScaffold4700379690 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| BceiScaffold480382470 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| BceiScaffold4840389180 | Terpenoid | CYP76 | low | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| BceiScaffold4950393340 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| BceiScaffold4950393350 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| BceiScaffold4950393360 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| BceiScaffold4950393370 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| BceiScaffold4980395590 | Terpenoid | CYP76 | low | borderline | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| BceiScaffold5000398880 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold5020402550 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold50397220 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold540412420 | Terpenoid | CYP76 | low | borderline | CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI |
| BceiScaffold540415670 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold5470417220 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold5650418720 | Terpenoid | CYP76 | medium | borderline | CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI |
| BceiScaffold5660418740 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| BceiScaffold5660418750 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| BceiScaffold570423180 | Terpenoid | CYP76 | low | borderline | CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF |
| BceiScaffold570423460 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |