PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
BceiScaffold1320073340 Flavonoid F3H medium borderline
BceiScaffold1320074740 Flavonoid F3H medium borderline
BceiScaffold1360079700 Flavonoid F3H medium borderline
BceiScaffold1360080650 Flavonoid F3H medium borderline
BceiScaffold1400086240 Flavonoid F3H medium borderline
BceiScaffold1400087300 Flavonoid F3H medium borderline
BceiScaffold1400087310 Flavonoid F3H medium borderline
BceiScaffold1530106970 Flavonoid F3H medium borderline
BceiScaffold1530106980 Flavonoid F3H medium borderline
BceiScaffold1530107000 Flavonoid F3H medium borderline
BceiScaffold1530107010 Flavonoid F3H medium borderline
BceiScaffold1560113230 Flavonoid F3H medium borderline
BceiScaffold1600115700 Flavonoid F3H medium borderline
BceiScaffold16420119200 Flavonoid F3H medium pass
BceiScaffold1730135250 Flavonoid F3H medium borderline
BceiScaffold18120143770 Flavonoid F3H medium borderline
BceiScaffold18120143780 Flavonoid F3H medium borderline
BceiScaffold18120143790 Flavonoid F3H medium borderline
BceiScaffold18120143800 Flavonoid F3H medium borderline
BceiScaffold18120143810 Flavonoid F3H medium borderline
BceiScaffold200161900 Flavonoid F3H medium borderline
BceiScaffold2060165610 Flavonoid F3H low borderline
BceiScaffold2060166380 Flavonoid F3H medium borderline
BceiScaffold210170040 Flavonoid F3H low borderline
BceiScaffold210171860 Flavonoid F3H medium borderline
BceiScaffold2110174680 Flavonoid F3H medium borderline
BceiScaffold2120175420 Flavonoid F3H low borderline
BceiScaffold21530177820 Flavonoid F3H medium borderline
BceiScaffold2200181070 Flavonoid F3H medium borderline
BceiScaffold2200182700 Flavonoid F3H medium borderline
BceiScaffold2200185280 Flavonoid F3H medium borderline
BceiScaffold2210187850 Flavonoid F3H medium borderline
BceiScaffold2210189060 Flavonoid F3H medium borderline
BceiScaffold2210190130 Flavonoid F3H medium borderline
BceiScaffold22210190760 Flavonoid F3H low borderline
BceiScaffold22210190770 Flavonoid F3H medium borderline
BceiScaffold22210190780 Flavonoid F3H medium borderline
BceiScaffold22210190810 Flavonoid F3H medium borderline
BceiScaffold2260198920 Flavonoid F3H medium borderline
BceiScaffold2280200220 Flavonoid F3H medium borderline
BceiScaffold2280200280 Flavonoid F3H medium borderline
BceiScaffold2290202120 Flavonoid F3H low borderline
BceiScaffold2290202140 Flavonoid F3H medium borderline
BceiScaffold2310207740 Flavonoid F3H medium borderline
BceiScaffold2310207750 Flavonoid F3H medium borderline
BceiScaffold2310207760 Flavonoid F3H medium borderline
BceiScaffold240211820 Flavonoid F3H medium borderline
BceiScaffold240211830 Flavonoid F3H medium pass
BceiScaffold240211840 Flavonoid F3H medium borderline
BceiScaffold240211850 Flavonoid F3H medium borderline