PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
BceiScaffold240211870 Flavonoid F3H low borderline
BceiScaffold240211880 Flavonoid F3H medium borderline
BceiScaffold240213710 Flavonoid F3H medium borderline
BceiScaffold240214090 Flavonoid F3H medium borderline
BceiScaffold25000232850 Flavonoid F3H medium borderline
BceiScaffold250228200 Flavonoid F3H medium borderline
BceiScaffold250230430 Flavonoid F3H medium borderline
BceiScaffold2580238150 Flavonoid F3H low borderline
BceiScaffold2580239300 Flavonoid F3H medium borderline
BceiScaffold2580241910 Flavonoid F3H medium borderline
BceiScaffold2580246190 Flavonoid F3H medium borderline
BceiScaffold2580246300 Flavonoid F3H medium borderline
BceiScaffold2600248960 Flavonoid F3H medium borderline
BceiScaffold2600248970 Flavonoid F3H medium borderline
BceiScaffold2830261930 Flavonoid F3H low borderline
BceiScaffold2830261940 Flavonoid F3H medium borderline
BceiScaffold2830261950 Flavonoid F3H medium borderline
BceiScaffold2830263600 Flavonoid F3H medium borderline
BceiScaffold30277860 Flavonoid F3H medium pass
BceiScaffold30283020 Flavonoid F3H low borderline
BceiScaffold30283350 Flavonoid F3H medium borderline
BceiScaffold3110288270 Flavonoid F3H medium borderline
BceiScaffold3110288280 Flavonoid F3H medium borderline
BceiScaffold3110288320 Flavonoid F3H medium borderline
BceiScaffold3210293610 Flavonoid F3H medium borderline
BceiScaffold3210293620 Flavonoid F3H medium borderline
BceiScaffold3210293630 Flavonoid F3H medium borderline
BceiScaffold3240296750 Flavonoid F3H medium borderline
BceiScaffold3300300530 Flavonoid F3H medium borderline
BceiScaffold340302800 Flavonoid F3H medium borderline
BceiScaffold3440303810 Flavonoid F3H medium borderline
BceiScaffold3520305810 Flavonoid F3H medium borderline
BceiScaffold360312870 Flavonoid F3H medium borderline
BceiScaffold3640315330 Flavonoid F3H medium borderline
BceiScaffold370318860 Flavonoid F3H low borderline
BceiScaffold370318870 Flavonoid F3H low borderline
BceiScaffold370318890 Flavonoid F3H low borderline
BceiScaffold370318900 Flavonoid F3H medium borderline
BceiScaffold3850326490 Flavonoid F3H low borderline
BceiScaffold3850327060 Flavonoid F3H low borderline
BceiScaffold400342180 Flavonoid F3H medium borderline
BceiScaffold40337740 Flavonoid F3H low borderline
BceiScaffold40338980 Flavonoid F3H medium borderline
BceiScaffold40339710 Flavonoid F3H low borderline
BceiScaffold40339730 Flavonoid F3H medium pass
BceiScaffold4120351250 Flavonoid F3H medium borderline
BceiScaffold4120354200 Flavonoid F3H medium borderline
BceiScaffold4130355320 Flavonoid F3H medium borderline
BceiScaffold4370367160 Flavonoid F3H medium borderline
BceiScaffold4400368310 Flavonoid F3H low borderline