PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
BceiScaffold480384590 Flavonoid F3H medium borderline
BceiScaffold4840389690 Flavonoid F3H medium borderline
BceiScaffold4980395520 Flavonoid F3H medium borderline
BceiScaffold5000399050 Flavonoid F3H medium borderline
BceiScaffold5000401740 Flavonoid F3H medium borderline
BceiScaffold5020403490 Flavonoid F3H low borderline
BceiScaffold5150407020 Flavonoid F3H medium borderline
BceiScaffold5150407030 Flavonoid F3H medium borderline
BceiScaffold520409040 Flavonoid F3H medium borderline
BceiScaffold520409070 Flavonoid F3H medium borderline
BceiScaffold520409250 Flavonoid F3H medium borderline
BceiScaffold540411630 Flavonoid F3H medium borderline
BceiScaffold540411640 Flavonoid F3H medium borderline
BceiScaffold5530417900 Flavonoid F3H medium borderline
BceiScaffold570421160 Flavonoid F3H medium borderline
BceiScaffold570422360 Flavonoid F3H medium borderline
BceiScaffold600436500 Flavonoid F3H medium borderline
BceiScaffold640443910 Flavonoid F3H medium borderline
BceiScaffold640446500 Flavonoid F3H medium pass
BceiScaffold640446750 Flavonoid F3H medium borderline
BceiScaffold640448910 Flavonoid F3H medium borderline
BceiScaffold650453800 Flavonoid F3H medium borderline
BceiScaffold660455800 Flavonoid F3H low borderline
BceiScaffold660456150 Flavonoid F3H medium borderline
BceiScaffold660459510 Flavonoid F3H medium borderline
BceiScaffold660459550 Flavonoid F3H medium borderline
BceiScaffold660459950 Flavonoid F3H medium borderline
BceiScaffold6730461030 Flavonoid F3H medium borderline
BceiScaffold6730461050 Flavonoid F3H medium borderline
BceiScaffold710464880 Flavonoid F3H medium borderline
BceiScaffold710464900 Flavonoid F3H medium borderline
BceiScaffold710464910 Flavonoid F3H medium pass
BceiScaffold710464920 Flavonoid F3H medium borderline
BceiScaffold710464960 Flavonoid F3H medium borderline
BceiScaffold710465140 Flavonoid F3H medium borderline
BceiScaffold730475690 Flavonoid F3H low borderline
BceiScaffold740478250 Flavonoid F3H medium borderline
BceiScaffold740482730 Flavonoid F3H medium borderline
BceiScaffold740483210 Flavonoid F3H medium borderline
BceiScaffold750483820 Flavonoid F3H medium borderline
BceiScaffold770485100 Flavonoid F3H medium borderline
BceiScaffold770485230 Flavonoid F3H medium borderline
BceiScaffold770485360 Flavonoid F3H medium borderline
BceiScaffold770485620 Flavonoid F3H medium borderline
BceiScaffold780487460 Flavonoid F3H medium borderline
BceiScaffold780487470 Flavonoid F3H medium borderline
BceiScaffold780487480 Flavonoid F3H medium borderline
BceiScaffold780487490 Flavonoid F3H medium borderline
BceiScaffold780487500 Flavonoid F3H medium borderline
BceiScaffold790493530 Flavonoid F3H medium borderline