PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
BceiScaffold1890150180 Alkaloid T3O medium borderline
BceiScaffold1890150190 Alkaloid T3O medium borderline
BceiScaffold1890150250 Alkaloid T3O low borderline
BceiScaffold1890151000 Alkaloid T3O medium pass
BceiScaffold1890152240 Alkaloid T3O medium pass
BceiScaffold1920154150 Alkaloid T3O medium borderline
BceiScaffold20161260 Alkaloid T3O medium borderline
BceiScaffold2020163500 Alkaloid T3O medium pass
BceiScaffold210169910 Alkaloid T3O medium borderline
BceiScaffold210169920 Alkaloid T3O medium borderline
BceiScaffold210171530 Alkaloid T3O medium pass
BceiScaffold2120175970 Alkaloid T3O low borderline
BceiScaffold2150177670 Alkaloid T3O medium borderline
BceiScaffold2200179800 Alkaloid T3O medium pass
BceiScaffold2200180220 Alkaloid T3O low borderline
BceiScaffold2200180290 Alkaloid T3O medium borderline
BceiScaffold2200180300 Alkaloid T3O medium borderline
BceiScaffold2200181040 Alkaloid T3O medium pass
BceiScaffold2200182300 Alkaloid T3O medium borderline
BceiScaffold2200182310 Alkaloid T3O medium borderline
BceiScaffold2200182980 Alkaloid T3O medium pass
BceiScaffold220179510 Alkaloid T3O medium pass
BceiScaffold22270191110 Alkaloid T3O medium borderline
BceiScaffold22270191130 Alkaloid T3O medium borderline
BceiScaffold2230193320 Alkaloid T3O medium pass
BceiScaffold2230194640 Alkaloid T3O low borderline
BceiScaffold22680199560 Alkaloid T3O low borderline
BceiScaffold2270199620 Alkaloid T3O medium pass
BceiScaffold2300203730 Alkaloid T3O medium borderline
BceiScaffold2300204320 Alkaloid T3O medium borderline
BceiScaffold2320208360 Alkaloid T3O medium borderline
BceiScaffold2320208430 Alkaloid T3O medium pass
BceiScaffold23870210910 Alkaloid T3O medium borderline
BceiScaffold2460218700 Alkaloid T3O medium borderline
BceiScaffold2490222680 Alkaloid T3O medium borderline
BceiScaffold250227090 Alkaloid T3O medium pass
BceiScaffold250227580 Alkaloid T3O low borderline
BceiScaffold250228960 Alkaloid T3O medium pass
BceiScaffold2580239210 Alkaloid T3O medium pass
BceiScaffold26580255090 Alkaloid T3O medium borderline
BceiScaffold26620255250 Alkaloid T3O medium pass
BceiScaffold280261430 Alkaloid T3O medium pass
BceiScaffold2830262150 Alkaloid T3O low borderline
BceiScaffold2830262160 Alkaloid T3O medium pass
BceiScaffold2830265260 Alkaloid T3O medium pass
BceiScaffold2850268180 Alkaloid T3O medium pass
BceiScaffold2850268190 Alkaloid T3O medium pass
BceiScaffold2930271510 Alkaloid T3O low borderline
BceiScaffold2930271680 Alkaloid T3O medium borderline
BceiScaffold2930272250 Alkaloid T3O medium borderline