PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
BceiScaffold2950272570 Alkaloid T3O medium borderline
BceiScaffold30273990 Alkaloid T3O medium pass
BceiScaffold30275040 Alkaloid T3O medium borderline
BceiScaffold30277790 Alkaloid T3O low borderline
BceiScaffold30278440 Alkaloid T3O low borderline
BceiScaffold3200291040 Alkaloid T3O medium borderline
BceiScaffold3200291070 Alkaloid T3O medium borderline
BceiScaffold3200291090 Alkaloid T3O medium borderline
BceiScaffold3210293300 Alkaloid T3O medium pass
BceiScaffold3240295590 Alkaloid T3O medium borderline
BceiScaffold3290299260 Alkaloid T3O medium borderline
BceiScaffold330299640 Alkaloid T3O low borderline
BceiScaffold3410303600 Alkaloid T3O medium pass
BceiScaffold3440304090 Alkaloid T3O medium borderline
BceiScaffold3500305430 Alkaloid T3O medium pass
BceiScaffold360308650 Alkaloid T3O medium borderline
BceiScaffold360308660 Alkaloid T3O medium borderline
BceiScaffold360310540 Alkaloid T3O medium pass
BceiScaffold3670318580 Alkaloid T3O medium borderline
BceiScaffold3720320630 Alkaloid T3O medium borderline
BceiScaffold3780322700 Alkaloid T3O medium borderline
BceiScaffold3920329810 Alkaloid T3O medium borderline
BceiScaffold3970331390 Alkaloid T3O medium borderline
BceiScaffold400341970 Alkaloid T3O low borderline
BceiScaffold400342980 Alkaloid T3O medium pass
BceiScaffold4010345320 Alkaloid T3O medium borderline
BceiScaffold4010345390 Alkaloid T3O medium pass
BceiScaffold40334790 Alkaloid T3O medium borderline
BceiScaffold40334800 Alkaloid T3O medium borderline
BceiScaffold40334810 Alkaloid T3O medium borderline
BceiScaffold40334820 Alkaloid T3O medium borderline
BceiScaffold40334830 Alkaloid T3O medium borderline
BceiScaffold40336070 Alkaloid T3O medium borderline
BceiScaffold40336130 Alkaloid T3O medium borderline
BceiScaffold40340360 Alkaloid T3O medium pass
BceiScaffold4100350130 Alkaloid T3O medium pass
BceiScaffold4100350420 Alkaloid T3O medium pass
BceiScaffold410349480 Alkaloid T3O medium borderline
BceiScaffold4120352610 Alkaloid T3O medium borderline
BceiScaffold4180357170 Alkaloid T3O medium pass
BceiScaffold4250358970 Alkaloid T3O low borderline
BceiScaffold430362430 Alkaloid T3O low borderline
BceiScaffold4330365450 Alkaloid T3O low borderline
BceiScaffold4330366060 Alkaloid T3O low borderline
BceiScaffold4460370590 Alkaloid T3O medium borderline
BceiScaffold4700379660 Alkaloid T3O medium borderline
BceiScaffold470377870 Alkaloid T3O medium borderline
BceiScaffold4740380190 Alkaloid T3O low borderline
BceiScaffold480381940 Alkaloid T3O medium borderline
BceiScaffold4810387940 Alkaloid T3O medium borderline