PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
BceiScaffold2930271130 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
BceiScaffold2930271140 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
BceiScaffold30282210 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
BceiScaffold3810324280 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
BceiScaffold3820324920 Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
BceiScaffold3820324930 Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
BceiScaffold3820324980 Terpenoid TPS medium pass TPS__00052__sp_A0A7G5KLV2_TPS3_CANOD
BceiScaffold3820324990 Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
BceiScaffold4000343990 Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
BceiScaffold4140355900 Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
BceiScaffold460376480 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
BceiScaffold4810387980 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
BceiScaffold4810387990 Terpenoid TPS medium pass TPS__00020__sp_A0A1V0QSF6_TS7FN_CANSA
BceiScaffold4810388000 Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
BceiScaffold5070405230 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
BceiScaffold5850425390 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
BceiScaffold660457260 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
BceiScaffold660457270 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
BceiScaffold770485570 Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
BceiScaffold780486820 Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
BceiScaffold780486830 Terpenoid TPS medium pass TPS__00055__sp_A7IZZ1_TPS1_CANSA
BceiScaffold780486850 Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
BceiScaffold780487800 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
BceiScaffold80502210 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
BceiScaffold80502220 Terpenoid TPS low borderline TPS__00130__sp_J7LQ09_TPS7_PHYDL
BceiScaffold80502270 Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
BceiScaffold8710507950 Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU