PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status
BceiScaffold1030012140 Alkaloid TRI/TRII low borderline
BceiScaffold10410014510 Alkaloid TRI/TRII medium pass
BceiScaffold1120041410 Alkaloid TRI/TRII medium pass
BceiScaffold1160048570 Alkaloid TRI/TRII low borderline
BceiScaffold12620064140 Alkaloid TRI/TRII low borderline
BceiScaffold1270069170 Alkaloid TRI/TRII low borderline
BceiScaffold1270069200 Alkaloid TRI/TRII low borderline
BceiScaffold1270069240 Alkaloid TRI/TRII low borderline
BceiScaffold1320072800 Alkaloid TRI/TRII medium pass
BceiScaffold1320074650 Alkaloid TRI/TRII medium pass
BceiScaffold1450097820 Alkaloid TRI/TRII medium pass
BceiScaffold1500103870 Alkaloid TRI/TRII low borderline
BceiScaffold1670123880 Alkaloid TRI/TRII low borderline
BceiScaffold1670123890 Alkaloid TRI/TRII medium pass
BceiScaffold1670124620 Alkaloid TRI/TRII low borderline
BceiScaffold1740139340 Alkaloid TRI/TRII medium pass
BceiScaffold19610159520 Alkaloid TRI/TRII medium pass
BceiScaffold19610159530 Alkaloid TRI/TRII medium pass
BceiScaffold19610159540 Alkaloid TRI/TRII medium pass
BceiScaffold2070168160 Alkaloid TRI/TRII medium pass
BceiScaffold2230191250 Alkaloid TRI/TRII medium pass
BceiScaffold2230193490 Alkaloid TRI/TRII low borderline
BceiScaffold2230193500 Alkaloid TRI/TRII medium pass
BceiScaffold2230193510 Alkaloid TRI/TRII medium pass
BceiScaffold2230193520 Alkaloid TRI/TRII medium pass
BceiScaffold2230193530 Alkaloid TRI/TRII medium pass
BceiScaffold2230193540 Alkaloid TRI/TRII medium pass
BceiScaffold2580239980 Alkaloid TRI/TRII low borderline
BceiScaffold2580242650 Alkaloid TRI/TRII medium pass
BceiScaffold2630252220 Alkaloid TRI/TRII low borderline
BceiScaffold290269820 Alkaloid TRI/TRII medium pass
BceiScaffold30280260 Alkaloid TRI/TRII medium pass
BceiScaffold30281560 Alkaloid TRI/TRII medium pass
BceiScaffold3210293390 Alkaloid TRI/TRII medium borderline
BceiScaffold360309970 Alkaloid TRI/TRII medium pass
BceiScaffold360309980 Alkaloid TRI/TRII medium pass
BceiScaffold360309990 Alkaloid TRI/TRII medium pass
BceiScaffold360310000 Alkaloid TRI/TRII medium pass
BceiScaffold360310010 Alkaloid TRI/TRII medium pass
BceiScaffold360313270 Alkaloid TRI/TRII medium pass
BceiScaffold4120354440 Alkaloid TRI/TRII medium pass
BceiScaffold4120354460 Alkaloid TRI/TRII medium pass
BceiScaffold4150356070 Alkaloid TRI/TRII low borderline
BceiScaffold4250359530 Alkaloid TRI/TRII medium pass
BceiScaffold4250359540 Alkaloid TRI/TRII medium pass
BceiScaffold4250359550 Alkaloid TRI/TRII medium pass
BceiScaffold4250359580 Alkaloid TRI/TRII medium pass
BceiScaffold4250359590 Alkaloid TRI/TRII medium pass
BceiScaffold4250359600 Alkaloid TRI/TRII medium pass
BceiScaffold4370367320 Alkaloid TRI/TRII low borderline