PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
BceiScaffold5000399350 Phenylpropanoid 4CL medium pass
BceiScaffold5150407050 Phenylpropanoid 4CL medium pass
BceiScaffold590429050 Phenylpropanoid 4CL medium pass
BceiScaffold640441680 Phenylpropanoid 4CL medium pass
BceiScaffold640445690 Phenylpropanoid 4CL low borderline
BceiScaffold650451860 Phenylpropanoid 4CL low borderline
BceiScaffold650451870 Phenylpropanoid 4CL medium pass
BceiScaffold710464990 Phenylpropanoid 4CL medium pass
BceiScaffold710465550 Phenylpropanoid 4CL medium pass
BceiScaffold80495480 Phenylpropanoid 4CL low borderline
BceiScaffold80497820 Phenylpropanoid 4CL medium pass
BceiScaffold890512990 Phenylpropanoid 4CL medium pass
BceiScaffold890514210 Phenylpropanoid 4CL medium pass
BceiScaffold890518210 Phenylpropanoid 4CL medium pass
BceiScaffold9750526250 Phenylpropanoid 4CL medium pass
BceiScaffold100005880 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold10300013310 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1030012100 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1030013240 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1050017350 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1060023840 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1090030030 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold1090030040 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1090030050 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold110031840 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold110032880 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold110035130 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1120040280 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1120040290 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1140042390 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold1150048020 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold1170054060 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1170054070 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1170054080 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1170054100 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1170054110 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold11890055110 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1250058960 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1250060880 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold12570063600 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1270065560 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1270066250 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold1270066260 Phenylpropanoid C3'H/CYP98A medium pass
BceiScaffold1270066270 Phenylpropanoid C3'H/CYP98A medium pass
BceiScaffold1270066280 Phenylpropanoid C3'H/CYP98A medium pass
BceiScaffold1270069380 Phenylpropanoid C3'H/CYP98A medium pass
BceiScaffold12770070300 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold1320073500 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold1320074310 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold1370082020 Phenylpropanoid C3'H/CYP98A medium borderline