PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2991
Candidate Protein Records
2549
Pathway-Level Records
6334
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BceiScaffold650451500 Alkaloid NMT medium pass
BceiScaffold650454880 Alkaloid NMT medium borderline
BceiScaffold710464060 Alkaloid NMT medium pass
BceiScaffold710465080 Alkaloid NMT low borderline
BceiScaffold710466160 Alkaloid NMT low borderline
BceiScaffold720471990 Alkaloid NMT low borderline
BceiScaffold720472000 Alkaloid NMT medium pass
BceiScaffold740476560 Alkaloid NMT medium pass
BceiScaffold740481460 Alkaloid NMT low borderline
BceiScaffold780487260 Alkaloid NMT low borderline
BceiScaffold790492030 Alkaloid NMT low borderline
BceiScaffold8720507990 Alkaloid NMT medium borderline
BceiScaffold890516550 Alkaloid NMT medium pass
BceiScaffold920520300 Alkaloid NMT medium borderline
BceiScaffold9280523160 Alkaloid NMT medium pass
BceiScaffold1670123470 Alkaloid ODC medium pass
BceiScaffold1670123500 Alkaloid ODC medium pass
BceiScaffold1670123510 Alkaloid ODC medium pass
BceiScaffold1890152060 Alkaloid ODC medium pass
BceiScaffold2460220080 Alkaloid ODC medium pass
BceiScaffold2620250340 Alkaloid ODC medium pass
BceiScaffold40332440 Alkaloid ODC medium pass
BceiScaffold40332450 Alkaloid ODC low borderline
BceiScaffold7510484390 Alkaloid ODC low borderline
BceiScaffold10000530 Alkaloid PMT medium pass
BceiScaffold1120041340 Alkaloid PMT low borderline
BceiScaffold1140043650 Alkaloid PMT medium pass
BceiScaffold1140046160 Alkaloid PMT low borderline
BceiScaffold1210056570 Alkaloid PMT low borderline
BceiScaffold1320073170 Alkaloid PMT low borderline
BceiScaffold1420090670 Alkaloid PMT low borderline
BceiScaffold160114840 Alkaloid PMT medium borderline
BceiScaffold1670120240 Alkaloid PMT low borderline
BceiScaffold1670120260 Alkaloid PMT low borderline
BceiScaffold1670120290 Alkaloid PMT medium pass
BceiScaffold1680128000 Alkaloid PMT low borderline
BceiScaffold1730135560 Alkaloid PMT low borderline
BceiScaffold1730135600 Alkaloid PMT low borderline
BceiScaffold1730135610 Alkaloid PMT low borderline
BceiScaffold1730135630 Alkaloid PMT low borderline
BceiScaffold1730135660 Alkaloid PMT medium pass
BceiScaffold1730135670 Alkaloid PMT low borderline
BceiScaffold1740139040 Alkaloid PMT medium pass
BceiScaffold18710147730 Alkaloid PMT medium pass
BceiScaffold2200185910 Alkaloid PMT medium borderline
BceiScaffold2210190010 Alkaloid PMT low borderline
BceiScaffold250224640 Alkaloid PMT low borderline
BceiScaffold2580242470 Alkaloid PMT medium pass
BceiScaffold3050286700 Alkaloid PMT medium borderline
BceiScaffold3070287070 Alkaloid PMT low borderline