PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2991
Candidate Protein Records
2549
Pathway-Level Records
6334
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BceiScaffold650450760 Alkaloid PYKS high pass
BceiScaffold720470890 Alkaloid PYKS low borderline
BceiScaffold720471570 Alkaloid PYKS high pass
BceiScaffold740477000 Alkaloid PYKS low borderline
BceiScaffold740483330 Alkaloid PYKS low borderline
BceiScaffold950524690 Alkaloid PYKS low borderline
BceiScaffold1260063670 Alkaloid SGD medium pass
BceiScaffold1260064040 Alkaloid SGD medium pass
BceiScaffold15870114670 Alkaloid SGD medium pass
BceiScaffold17000134630 Alkaloid SGD medium pass
BceiScaffold1960159150 Alkaloid SGD medium pass
BceiScaffold1960159160 Alkaloid SGD medium pass
BceiScaffold2010162850 Alkaloid SGD medium pass
BceiScaffold2200186130 Alkaloid SGD medium pass
BceiScaffold2230195860 Alkaloid SGD medium pass
BceiScaffold250231700 Alkaloid SGD medium pass
BceiScaffold2580243900 Alkaloid SGD medium pass
BceiScaffold30281140 Alkaloid SGD medium pass
BceiScaffold4120352280 Alkaloid SGD medium pass
BceiScaffold4120352290 Alkaloid SGD medium pass
BceiScaffold4390367700 Alkaloid SGD medium pass
BceiScaffold4390367710 Alkaloid SGD medium pass
BceiScaffold4400368930 Alkaloid SGD low borderline
BceiScaffold480385800 Alkaloid SGD medium pass
BceiScaffold480385810 Alkaloid SGD medium pass
BceiScaffold590427070 Alkaloid SGD medium pass
BceiScaffold640449900 Alkaloid SGD medium pass
BceiScaffold660456770 Alkaloid SGD medium pass
BceiScaffold80502580 Alkaloid SGD medium pass
BceiScaffold80502590 Alkaloid SGD medium pass
BceiScaffold1050017350 Alkaloid SLS medium borderline
BceiScaffold110031840 Alkaloid SLS medium borderline
BceiScaffold1170054090 Alkaloid SLS medium borderline
BceiScaffold1170054100 Alkaloid SLS medium borderline
BceiScaffold1170054110 Alkaloid SLS medium borderline
BceiScaffold1960158860 Alkaloid SLS medium borderline
BceiScaffold2230192920 Alkaloid SLS medium borderline
BceiScaffold23070206910 Alkaloid SLS low borderline
BceiScaffold2580239220 Alkaloid SLS medium borderline
BceiScaffold2830265410 Alkaloid SLS medium borderline
BceiScaffold3440303890 Alkaloid SLS medium borderline
BceiScaffold3550306170 Alkaloid SLS medium borderline
BceiScaffold40334360 Alkaloid SLS medium borderline
BceiScaffold4050347460 Alkaloid SLS medium borderline
BceiScaffold4050347480 Alkaloid SLS medium borderline
BceiScaffold4480371390 Alkaloid SLS medium borderline
BceiScaffold4980395590 Alkaloid SLS medium borderline
BceiScaffold540412420 Alkaloid SLS medium borderline
BceiScaffold540414430 Alkaloid SLS medium borderline
BceiScaffold700462880 Alkaloid SLS medium borderline