PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
BceiScaffold3340301390 Alkaloid 7DLGT medium pass
BceiScaffold350305330 Alkaloid 7DLGT medium pass
BceiScaffold360308190 Alkaloid 7DLGT low borderline
BceiScaffold3640317000 Alkaloid 7DLGT low borderline
BceiScaffold3640317410 Alkaloid 7DLGT medium pass
BceiScaffold3670318600 Alkaloid 7DLGT low borderline
BceiScaffold3720320790 Alkaloid 7DLGT medium pass
BceiScaffold3720320800 Alkaloid 7DLGT low borderline
BceiScaffold3720320830 Alkaloid 7DLGT medium pass
BceiScaffold3720320840 Alkaloid 7DLGT low borderline
BceiScaffold3720320870 Alkaloid 7DLGT medium pass
BceiScaffold3720320890 Alkaloid 7DLGT low borderline
BceiScaffold3900328410 Alkaloid 7DLGT medium pass
BceiScaffold3900328430 Alkaloid 7DLGT medium pass
BceiScaffold3900328440 Alkaloid 7DLGT medium pass
BceiScaffold3930330280 Alkaloid 7DLGT high pass
BceiScaffold3960330780 Alkaloid 7DLGT medium pass
BceiScaffold3960330800 Alkaloid 7DLGT medium pass
BceiScaffold4000344000 Alkaloid 7DLGT medium pass
BceiScaffold400341720 Alkaloid 7DLGT low borderline
BceiScaffold40335700 Alkaloid 7DLGT medium pass
BceiScaffold40338110 Alkaloid 7DLGT high pass
BceiScaffold40338130 Alkaloid 7DLGT medium pass
BceiScaffold4260360570 Alkaloid 7DLGT low borderline
BceiScaffold4260360580 Alkaloid 7DLGT low borderline
BceiScaffold4260360650 Alkaloid 7DLGT low borderline
BceiScaffold430361270 Alkaloid 7DLGT low borderline
BceiScaffold4440370110 Alkaloid 7DLGT high pass
BceiScaffold470377340 Alkaloid 7DLGT medium pass
BceiScaffold470377400 Alkaloid 7DLGT medium pass
BceiScaffold470377430 Alkaloid 7DLGT high pass
BceiScaffold470377440 Alkaloid 7DLGT high pass
BceiScaffold470377450 Alkaloid 7DLGT high pass
BceiScaffold480384420 Alkaloid 7DLGT low borderline
BceiScaffold480385160 Alkaloid 7DLGT low borderline
BceiScaffold480385170 Alkaloid 7DLGT low borderline
BceiScaffold480385990 Alkaloid 7DLGT low borderline
BceiScaffold490392220 Alkaloid 7DLGT low borderline
BceiScaffold5000399080 Alkaloid 7DLGT low borderline
BceiScaffold5000399090 Alkaloid 7DLGT medium pass
BceiScaffold5000399100 Alkaloid 7DLGT low borderline
BceiScaffold5000399540 Alkaloid 7DLGT low borderline
BceiScaffold5000399550 Alkaloid 7DLGT low borderline
BceiScaffold5030403910 Alkaloid 7DLGT low borderline
BceiScaffold50397100 Alkaloid 7DLGT low borderline
BceiScaffold5070404730 Alkaloid 7DLGT low borderline
BceiScaffold5150406990 Alkaloid 7DLGT low borderline
BceiScaffold540411990 Alkaloid 7DLGT low borderline
BceiScaffold540414120 Alkaloid 7DLGT low borderline
BceiScaffold540414130 Alkaloid 7DLGT low borderline