PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
BceiScaffold540414150 Alkaloid 7DLGT low borderline
BceiScaffold540414160 Alkaloid 7DLGT low borderline
BceiScaffold540414170 Alkaloid 7DLGT low borderline
BceiScaffold5470417250 Alkaloid 7DLGT medium pass
BceiScaffold5530417860 Alkaloid 7DLGT low borderline
BceiScaffold5530417880 Alkaloid 7DLGT medium pass
BceiScaffold570421830 Alkaloid 7DLGT medium pass
BceiScaffold590426040 Alkaloid 7DLGT medium pass
BceiScaffold590427480 Alkaloid 7DLGT low borderline
BceiScaffold590428990 Alkaloid 7DLGT low borderline
BceiScaffold600432060 Alkaloid 7DLGT low borderline
BceiScaffold600433630 Alkaloid 7DLGT low borderline
BceiScaffold600435270 Alkaloid 7DLGT medium pass
BceiScaffold600435290 Alkaloid 7DLGT low borderline
BceiScaffold60431080 Alkaloid 7DLGT medium pass
BceiScaffold630440260 Alkaloid 7DLGT medium pass
BceiScaffold630440540 Alkaloid 7DLGT low borderline
BceiScaffold630440550 Alkaloid 7DLGT low borderline
BceiScaffold630440560 Alkaloid 7DLGT low borderline
BceiScaffold630440580 Alkaloid 7DLGT medium pass
BceiScaffold630440600 Alkaloid 7DLGT high pass
BceiScaffold630440610 Alkaloid 7DLGT medium pass
BceiScaffold630440620 Alkaloid 7DLGT medium pass
BceiScaffold630440630 Alkaloid 7DLGT low borderline
BceiScaffold640447890 Alkaloid 7DLGT medium pass
BceiScaffold6480450570 Alkaloid 7DLGT high pass
BceiScaffold6480450590 Alkaloid 7DLGT high pass
BceiScaffold6480450620 Alkaloid 7DLGT high pass
BceiScaffold650453900 Alkaloid 7DLGT high pass
BceiScaffold660458490 Alkaloid 7DLGT low borderline
BceiScaffold70462860 Alkaloid 7DLGT medium pass
BceiScaffold710467900 Alkaloid 7DLGT low borderline
BceiScaffold720469080 Alkaloid 7DLGT low borderline
BceiScaffold720470020 Alkaloid 7DLGT medium pass
BceiScaffold720470040 Alkaloid 7DLGT medium pass
BceiScaffold720470080 Alkaloid 7DLGT low borderline
BceiScaffold720473540 Alkaloid 7DLGT medium pass
BceiScaffold740478530 Alkaloid 7DLGT low borderline
BceiScaffold760484650 Alkaloid 7DLGT low borderline
BceiScaffold790490610 Alkaloid 7DLGT low borderline
BceiScaffold790492040 Alkaloid 7DLGT medium pass
BceiScaffold790492050 Alkaloid 7DLGT medium pass
BceiScaffold790492060 Alkaloid 7DLGT low borderline
BceiScaffold790493190 Alkaloid 7DLGT medium pass
BceiScaffold880509240 Alkaloid 7DLGT medium pass
BceiScaffold890513150 Alkaloid 7DLGT medium pass
BceiScaffold890513160 Alkaloid 7DLGT medium pass
BceiScaffold890513170 Alkaloid 7DLGT medium pass
BceiScaffold890518300 Alkaloid 7DLGT low borderline
BceiScaffold1170054060 Alkaloid 7DLH medium borderline