Bombax ceiba (bombax_ceiba)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 30.36% Phenylpropanoid pathway 21.62% Alkaloid pathway 21.22% Flavonoid pathway 12.28% Rosmarinic acid pathway 8.32% Steroid pathway 6.2%

Family Distribution

2549 Candidate Genes

C4H 6.66% C3'H/CYP98A 6.06% BAHD 5.35% UGT 4.12% CYP76 3.96% IFS 3.8% 7DLGT 3.43% F3H 3.41%

Other Families 63.2%

More Families (96)

T3O 210 3.32% UFGT 209 3.3% POD 208 3.28% 4CL 195 3.08% DWF4/CYP90B1 170 2.68% NMT 142 2.24% CODM/T6ODM 131 2.07% BR6OX2/CYP85A2 122 1.93% F3'H/CYP75B 111 1.75% STR 104 1.64% H6H 100 1.58% CAD 96 1.52% LAC 84 1.33% CYP71 83 1.31% CAS 80 1.26% TPS 77 1.22% HCT 70 1.11% SMT1/SMT2/SMT3 70 1.11% GES 67 1.06% CSE 66 1.04% TRI/TRII 65 1.03% BBE 65 1.03% T16H 62 0.98% CYP90D1 59 0.93% F3'5'H/CYP75A 56 0.88% G8O/G8H 54 0.85% COMT 54 0.85% RAS 50 0.79% IO 49 0.77% PYKS 48 0.76% IFR 48 0.76% PAL 48 0.76% 7DLH 45 0.71% GS 44 0.69% FNS 42 0.66% F5H/CYP84A 38 0.6% TAT 35 0.55% PMT 34 0.54% NCS 34 0.54% ANR 34 0.54% CPD/CYP90A1 34 0.54% 16OMT 32 0.51% CCR 32 0.51% ANS/LDOX 30 0.47% LAMT 28 0.44% SLS 24 0.38% SGD 24 0.38% BR6OX1/CYP85A1 24 0.38% COR 23 0.36% GGPPS 23 0.36% SQE 22 0.35% DFR 19 0.3% CYP719 18 0.28% CCoAOMT 18 0.28% CYP51G1 17 0.27% FPPS 17 0.27% 8HGO 16 0.25% CHS 16 0.25% CYP80B1 15 0.24% MPO 13 0.21% TYDC_DDC 12 0.19% CPR 12 0.19% CNMT 11 0.17% HPPR 11 0.17% ROT3/CYP90C1 11 0.17% AACT 11 0.17% ODC 9 0.14% SMO1/SMO2 9 0.14% HMGR 9 0.14% TDC 8 0.13% SQS/FDFT1 8 0.13% CHI 7 0.11% DXS 7 0.11% ADC 6 0.09% HDR/IspH 6 0.09% ISY 5 0.08% MVK 5 0.08% MVD 5 0.08% HMGS 5 0.08% DET2 4 0.06% DWF7 4 0.06% HDS/IspG 4 0.06% IDI 4 0.06% MDS/IspF 4 0.06% FK 3 0.05% MCT/IspD 3 0.05% DXR 3 0.05% PMK 3 0.05% DWF1 2 0.03% GPPS 2 0.03% XMT_MXMT_DXMT 1 0.02% FLS 1 0.02% HYD1 1 0.02% CPI1 1 0.02% DWF5 1 0.02% CMK/IspE 1 0.02%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	774	21	BAHD (273)	View species results
Phenylpropanoid pathway	551	11	POD (204)	View species results
Alkaloid pathway	541	24	7DLGT (105)	View species results
Flavonoid pathway	313	13	UFGT (186)	View species results
Rosmarinic acid pathway	212	7	C4H (83)	View species results
Steroid pathway	158	12	CAS (71)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	2500	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	459	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current pathway filter: Terpenoid pathway

Gene	Pathway	Family	Confidence	Status	Best Target
BceiScaffold2460219190	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
BceiScaffold2490223010	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
BceiScaffold2490223580	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
BceiScaffold250224640	Terpenoid	BAHD	medium	pass	BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
BceiScaffold250225160	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
BceiScaffold250228370	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
BceiScaffold2530235680	Terpenoid	BAHD	medium	pass	BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
BceiScaffold2580238910	Terpenoid	BAHD	medium	pass	BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
BceiScaffold2580239350	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
BceiScaffold2580240140	Terpenoid	BAHD	medium	pass	BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
BceiScaffold2580241700	Terpenoid	BAHD	low	borderline	BAHD__00065__sp_Q94C49_ZDH18_ARATH
BceiScaffold2580242380	Terpenoid	BAHD	medium	pass	BAHD__00084__sp_Q9M115_ZDH16_ARATH
BceiScaffold2580242430	Terpenoid	BAHD	medium	pass	BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
BceiScaffold2580242470	Terpenoid	BAHD	medium	pass	BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC
BceiScaffold2620250270	Terpenoid	BAHD	low	borderline	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
BceiScaffold2620250530	Terpenoid	BAHD	medium	pass	BAHD__00037__sp_Q3EBC2_ZDHC5_ARATH
BceiScaffold2630251520	Terpenoid	BAHD	medium	pass	BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
BceiScaffold2670255610	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
BceiScaffold270256750	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
BceiScaffold2750259720	Terpenoid	BAHD	low	borderline	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
BceiScaffold2830263560	Terpenoid	BAHD	medium	pass	BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
BceiScaffold2830265370	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
BceiScaffold2830266620	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
BceiScaffold2930271340	Terpenoid	BAHD	medium	pass	BAHD__00089__sp_Q9SB58_ZDH19_ARATH
BceiScaffold2970272990	Terpenoid	BAHD	medium	pass	BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
BceiScaffold30275750	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
BceiScaffold30276940	Terpenoid	BAHD	medium	pass	BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
BceiScaffold30277620	Terpenoid	BAHD	medium	pass	BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
BceiScaffold30279180	Terpenoid	BAHD	medium	pass	BAHD__00047__sp_Q5KS41_WSD11_ARATH
BceiScaffold30279190	Terpenoid	BAHD	medium	pass	BAHD__00047__sp_Q5KS41_WSD11_ARATH
BceiScaffold30279610	Terpenoid	BAHD	medium	pass	BAHD__00048__sp_Q5M757_ZDH15_ARATH
BceiScaffold30280160	Terpenoid	BAHD	medium	pass	BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
BceiScaffold30283670	Terpenoid	BAHD	medium	pass	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
BceiScaffold30283680	Terpenoid	BAHD	low	borderline	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
BceiScaffold3030285900	Terpenoid	BAHD	medium	pass	BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
BceiScaffold3030286450	Terpenoid	BAHD	medium	pass	BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
BceiScaffold3060286940	Terpenoid	BAHD	medium	pass	BAHD__00014__sp_B9RK42_GPC1_RICCO
BceiScaffold3070287070	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
BceiScaffold310287720	Terpenoid	BAHD	low	borderline	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
BceiScaffold3120288610	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
BceiScaffold3160289000	Terpenoid	BAHD	medium	pass	BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
BceiScaffold3200290700	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
BceiScaffold3200291730	Terpenoid	BAHD	low	borderline	BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
BceiScaffold3200291770	Terpenoid	BAHD	low	borderline	BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
BceiScaffold3210293110	Terpenoid	BAHD	medium	pass	BAHD__00047__sp_Q5KS41_WSD11_ARATH
BceiScaffold3240297100	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
BceiScaffold3290298760	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
BceiScaffold3290298790	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
BceiScaffold3290299100	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
BceiScaffold3600313630	Terpenoid	BAHD	low	borderline	BAHD__00095__sp_Q9SZ58_BRAT1_ARATH