PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2991
Candidate Protein Records
2549
Pathway-Level Records
6334
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BceiScaffold40334830 Rosmarinic Acid C4H low borderline
BceiScaffold40335410 Rosmarinic Acid C4H low borderline
BceiScaffold40336050 Rosmarinic Acid C4H low borderline
BceiScaffold40336070 Rosmarinic Acid C4H medium pass
BceiScaffold40336130 Rosmarinic Acid C4H medium pass
BceiScaffold40340360 Rosmarinic Acid C4H low borderline
BceiScaffold40340370 Rosmarinic Acid C4H low borderline
BceiScaffold4050347480 Rosmarinic Acid C4H low borderline
BceiScaffold4100350420 Rosmarinic Acid C4H low borderline
BceiScaffold410349480 Rosmarinic Acid C4H low borderline
BceiScaffold4120352610 Rosmarinic Acid C4H low borderline
BceiScaffold4120352630 Rosmarinic Acid C4H low borderline
BceiScaffold4120352650 Rosmarinic Acid C4H low borderline
BceiScaffold4120353600 Rosmarinic Acid C4H low borderline
BceiScaffold4160356550 Rosmarinic Acid C4H medium pass
BceiScaffold4180357170 Rosmarinic Acid C4H low borderline
BceiScaffold4230358410 Rosmarinic Acid C4H low borderline
BceiScaffold4250358970 Rosmarinic Acid C4H low borderline
BceiScaffold430364030 Rosmarinic Acid C4H low borderline
BceiScaffold4310364900 Rosmarinic Acid C4H low borderline
BceiScaffold4310364920 Rosmarinic Acid C4H low borderline
BceiScaffold4310364940 Rosmarinic Acid C4H low borderline
BceiScaffold4310364970 Rosmarinic Acid C4H low borderline
BceiScaffold4310365150 Rosmarinic Acid C4H medium pass
BceiScaffold4460370590 Rosmarinic Acid C4H low borderline
BceiScaffold4540373040 Rosmarinic Acid C4H low borderline
BceiScaffold4700379660 Rosmarinic Acid C4H medium pass
BceiScaffold4700379690 Rosmarinic Acid C4H low borderline
BceiScaffold470377870 Rosmarinic Acid C4H low borderline
BceiScaffold480381940 Rosmarinic Acid C4H low borderline
BceiScaffold480382470 Rosmarinic Acid C4H low borderline
BceiScaffold480385320 Rosmarinic Acid C4H low borderline
BceiScaffold480385330 Rosmarinic Acid C4H low borderline
BceiScaffold480385340 Rosmarinic Acid C4H low borderline
BceiScaffold4810387940 Rosmarinic Acid C4H low borderline
BceiScaffold4840389180 Rosmarinic Acid C4H low borderline
BceiScaffold4950393340 Rosmarinic Acid C4H medium pass
BceiScaffold4950393350 Rosmarinic Acid C4H medium pass
BceiScaffold4950393360 Rosmarinic Acid C4H medium pass
BceiScaffold4950393370 Rosmarinic Acid C4H low borderline
BceiScaffold4980395590 Rosmarinic Acid C4H low borderline
BceiScaffold5000398880 Rosmarinic Acid C4H low borderline
BceiScaffold5020402550 Rosmarinic Acid C4H medium pass
BceiScaffold50397210 Rosmarinic Acid C4H low borderline
BceiScaffold50397220 Rosmarinic Acid C4H medium pass
BceiScaffold5110406580 Rosmarinic Acid C4H low borderline
BceiScaffold540412420 Rosmarinic Acid C4H low borderline
BceiScaffold540414430 Rosmarinic Acid C4H low borderline
BceiScaffold540415670 Rosmarinic Acid C4H low borderline
BceiScaffold5470417220 Rosmarinic Acid C4H low borderline