PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2991
Candidate Protein Records
2549
Pathway-Level Records
6334
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BceiScaffold3080287440 Alkaloid BBE medium borderline
BceiScaffold3080287460 Alkaloid BBE medium borderline
BceiScaffold3200291960 Alkaloid BBE low borderline
BceiScaffold3600313490 Alkaloid BBE medium borderline
BceiScaffold3600313500 Alkaloid BBE medium borderline
BceiScaffold4000344320 Alkaloid BBE medium borderline
BceiScaffold4260360060 Alkaloid BBE medium borderline
BceiScaffold4260360070 Alkaloid BBE medium borderline
BceiScaffold4260360090 Alkaloid BBE medium borderline
BceiScaffold4260360100 Alkaloid BBE medium borderline
BceiScaffold4260360110 Alkaloid BBE medium borderline
BceiScaffold4260360120 Alkaloid BBE medium borderline
BceiScaffold430361670 Alkaloid BBE medium borderline
BceiScaffold4460370480 Alkaloid BBE medium borderline
BceiScaffold4460370490 Alkaloid BBE medium borderline
BceiScaffold4830388200 Alkaloid BBE medium borderline
BceiScaffold4830388210 Alkaloid BBE medium borderline
BceiScaffold4830388220 Alkaloid BBE medium borderline
BceiScaffold4830388230 Alkaloid BBE medium borderline
BceiScaffold4840389050 Alkaloid BBE medium borderline
BceiScaffold4840389060 Alkaloid BBE medium borderline
BceiScaffold570421390 Alkaloid BBE medium borderline
BceiScaffold570421400 Alkaloid BBE medium borderline
BceiScaffold620437600 Alkaloid BBE medium borderline
BceiScaffold620437670 Alkaloid BBE medium borderline
BceiScaffold640448520 Alkaloid BBE medium borderline
BceiScaffold7140468410 Alkaloid BBE medium borderline
BceiScaffold740480600 Alkaloid BBE low borderline
BceiScaffold880509500 Alkaloid BBE medium borderline
BceiScaffold890511170 Alkaloid BBE medium borderline
BceiScaffold890511180 Alkaloid BBE medium borderline
BceiScaffold10002320 Alkaloid CNMT medium pass
BceiScaffold1700134310 Alkaloid CNMT low borderline
BceiScaffold260248400 Alkaloid CNMT low borderline
BceiScaffold2650254340 Alkaloid CNMT low borderline
BceiScaffold40338160 Alkaloid CNMT low borderline
BceiScaffold4120351630 Alkaloid CNMT low borderline
BceiScaffold480386530 Alkaloid CNMT low borderline
BceiScaffold5000401670 Alkaloid CNMT low borderline
BceiScaffold540415380 Alkaloid CNMT medium borderline
BceiScaffold540415410 Alkaloid CNMT medium borderline
BceiScaffold540415450 Alkaloid CNMT medium borderline
BceiScaffold10001790 Alkaloid CODM/T6ODM medium borderline
BceiScaffold10001800 Alkaloid CODM/T6ODM medium borderline
BceiScaffold10001810 Alkaloid CODM/T6ODM medium borderline
BceiScaffold10004700 Alkaloid CODM/T6ODM medium borderline
BceiScaffold1030012250 Alkaloid CODM/T6ODM medium borderline
BceiScaffold1030012260 Alkaloid CODM/T6ODM medium borderline
BceiScaffold1050017100 Alkaloid CODM/T6ODM medium borderline
BceiScaffold1050017130 Alkaloid CODM/T6ODM medium borderline