PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

2196
Candidate Protein Records
1727
Pathway-Level Records
4621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
OBART06G18930.2 Rosmarinic Acid C4H low borderline
OBART06G18950.1 Rosmarinic Acid C4H low borderline
OBART06G18970.1 Rosmarinic Acid C4H low borderline
OBART06G18990.1 Rosmarinic Acid C4H low borderline
OBART06G19000.1 Rosmarinic Acid C4H low borderline
OBART06G19000.2 Rosmarinic Acid C4H low borderline
OBART06G20970.1 Rosmarinic Acid C4H medium pass
OBART06G21840.1 Rosmarinic Acid C4H low borderline
OBART06G22330.1 Rosmarinic Acid C4H low borderline
OBART06G22330.2 Rosmarinic Acid C4H low borderline
OBART06G22350.1 Rosmarinic Acid C4H low borderline
OBART06G22380.1 Rosmarinic Acid C4H low borderline
OBART06G22380.2 Rosmarinic Acid C4H medium pass
OBART06G22390.1 Rosmarinic Acid C4H medium pass
OBART06G22400.1 Rosmarinic Acid C4H medium pass
OBART06G22410.1 Rosmarinic Acid C4H low borderline
OBART06G22430.1 Rosmarinic Acid C4H medium pass
OBART06G22440.1 Rosmarinic Acid C4H low borderline
OBART06G24350.1 Rosmarinic Acid C4H medium pass
OBART07G07310.1 Rosmarinic Acid C4H low borderline
OBART07G07320.1 Rosmarinic Acid C4H low borderline
OBART07G07340.1 Rosmarinic Acid C4H medium pass
OBART07G10620.1 Rosmarinic Acid C4H medium pass
OBART07G10640.1 Rosmarinic Acid C4H low borderline
OBART07G10670.1 Rosmarinic Acid C4H low borderline
OBART07G11730.1 Rosmarinic Acid C4H low borderline
OBART07G11790.1 Rosmarinic Acid C4H low borderline
OBART07G12970.1 Rosmarinic Acid C4H low borderline
OBART07G12980.1 Rosmarinic Acid C4H low borderline
OBART07G13570.1 Rosmarinic Acid C4H low borderline
OBART07G14860.1 Rosmarinic Acid C4H low borderline
OBART07G16320.1 Rosmarinic Acid C4H low borderline
OBART07G16370.1 Rosmarinic Acid C4H low borderline
OBART07G16380.1 Rosmarinic Acid C4H low borderline
OBART07G16380.2 Rosmarinic Acid C4H low borderline
OBART07G16400.1 Rosmarinic Acid C4H low borderline
OBART07G16400.2 Rosmarinic Acid C4H low borderline
OBART07G16400.3 Rosmarinic Acid C4H low borderline
OBART07G21420.1 Rosmarinic Acid C4H medium pass
OBART07G23430.1 Rosmarinic Acid C4H low borderline
OBART07G23430.2 Rosmarinic Acid C4H low borderline
OBART07G24110.1 Rosmarinic Acid C4H low borderline
OBART07G24320.1 Rosmarinic Acid C4H low borderline
OBART07G26500.1 Rosmarinic Acid C4H low borderline
OBART08G00400.1 Rosmarinic Acid C4H low borderline
OBART08G00410.1 Rosmarinic Acid C4H medium pass
OBART08G00420.1 Rosmarinic Acid C4H medium pass
OBART08G00430.1 Rosmarinic Acid C4H medium pass
OBART08G00450.1 Rosmarinic Acid C4H medium pass
OBART08G00470.1 Rosmarinic Acid C4H medium pass