PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

2196
Candidate Protein Records
1727
Pathway-Level Records
4621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
OBART06G21350.1 Phenylpropanoid CCR low borderline
OBART06G21360.1 Phenylpropanoid CCR medium borderline
OBART06G21390.1 Phenylpropanoid CCR medium borderline
OBART06G23020.1 Phenylpropanoid CCR low borderline
OBART06G23020.2 Phenylpropanoid CCR low borderline
OBART06G23020.3 Phenylpropanoid CCR low borderline
OBART07G20990.1 Phenylpropanoid CCR medium pass
OBART07G21230.1 Phenylpropanoid CCR medium pass
OBART07G21240.1 Phenylpropanoid CCR medium pass
OBART07G21270.1 Phenylpropanoid CCR medium pass
OBART07G21280.1 Phenylpropanoid CCR low borderline
OBART08G04960.1 Phenylpropanoid CCR medium borderline
OBART08G04960.2 Phenylpropanoid CCR medium borderline
OBART08G04960.3 Phenylpropanoid CCR medium borderline
OBART08G08680.1 Phenylpropanoid CCR medium borderline
OBART08G16180.1 Phenylpropanoid CCR medium borderline
OBART09G01240.1 Phenylpropanoid CCR medium borderline
OBART09G02720.1 Phenylpropanoid CCR medium borderline
OBART09G02790.1 Phenylpropanoid CCR medium borderline
OBART09G02790.2 Phenylpropanoid CCR medium borderline
OBART09G10420.1 Phenylpropanoid CCR medium borderline
OBART09G14920.1 Phenylpropanoid CCR low borderline
OBART09G14920.2 Phenylpropanoid CCR low borderline
OBART09G14920.3 Phenylpropanoid CCR low borderline
OBART09G14980.1 Phenylpropanoid CCR low borderline
OBART10G13250.1 Phenylpropanoid CCR medium borderline
OBART10G19520.1 Phenylpropanoid CCR medium borderline
OBART06G04420.1 Phenylpropanoid CCoAOMT medium pass
OBART08G03200.1 Phenylpropanoid CCoAOMT medium pass
OBART08G03200.2 Phenylpropanoid CCoAOMT medium pass
OBART08G19290.1 Phenylpropanoid CCoAOMT medium pass
OBART08G19290.2 Phenylpropanoid CCoAOMT medium pass
OBART08G19290.3 Phenylpropanoid CCoAOMT medium pass
OBART08G19290.4 Phenylpropanoid CCoAOMT medium pass
OBART08G19290.5 Phenylpropanoid CCoAOMT medium pass
OBART08G19300.1 Phenylpropanoid CCoAOMT medium pass
OBART09G14180.1 Phenylpropanoid CCoAOMT medium pass
OBART01G31140.1 Phenylpropanoid COMT low borderline
OBART02G37810.1 Phenylpropanoid COMT medium pass
OBART04G02740.1 Phenylpropanoid COMT medium pass
OBART04G02760.1 Phenylpropanoid COMT medium pass
OBART04G02760.2 Phenylpropanoid COMT medium pass
OBART04G02770.1 Phenylpropanoid COMT medium pass
OBART04G03800.1 Phenylpropanoid COMT low borderline
OBART04G29630.1 Phenylpropanoid COMT low borderline
OBART05G09920.1 Phenylpropanoid COMT low borderline
OBART05G22680.1 Phenylpropanoid COMT medium pass
OBART05G22690.1 Phenylpropanoid COMT medium pass
OBART06G09030.1 Phenylpropanoid COMT low borderline
OBART06G10780.1 Phenylpropanoid COMT low borderline