PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

2196
Candidate Protein Records
1727
Pathway-Level Records
4621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
OBART07G05030.1 Phenylpropanoid COMT low borderline
OBART07G13410.1 Phenylpropanoid COMT low borderline
OBART07G13490.1 Phenylpropanoid COMT low borderline
OBART07G13500.1 Phenylpropanoid COMT low borderline
OBART07G23990.1 Phenylpropanoid COMT low borderline
OBART07G24300.1 Phenylpropanoid COMT low borderline
OBART08G03420.1 Phenylpropanoid COMT medium pass
OBART08G04170.1 Phenylpropanoid COMT medium pass
OBART08G09390.1 Phenylpropanoid COMT medium pass
OBART08G17000.1 Phenylpropanoid COMT medium pass
OBART09G06540.1 Phenylpropanoid COMT medium pass
OBART10G00870.1 Phenylpropanoid COMT medium pass
OBART10G00900.1 Phenylpropanoid COMT medium pass
OBART10G03140.1 Phenylpropanoid COMT medium pass
OBART11G07680.1 Phenylpropanoid COMT medium pass
OBART11G10590.1 Phenylpropanoid COMT low borderline
OBART11G10690.1 Phenylpropanoid COMT low borderline
OBART11G10700.1 Phenylpropanoid COMT low borderline
OBART11G16110.1 Phenylpropanoid COMT medium pass
OBART12G05700.1 Phenylpropanoid COMT medium pass
OBART12G07130.1 Phenylpropanoid COMT medium pass
OBART12G10810.1 Phenylpropanoid COMT low borderline
OBART12G10830.1 Phenylpropanoid COMT medium pass
OBART12G10840.1 Phenylpropanoid COMT low borderline
OBART12G10960.1 Phenylpropanoid COMT medium pass
OBART12G18810.1 Phenylpropanoid COMT low borderline
OBART01G13170.1 Phenylpropanoid CSE medium pass
OBART01G14570.1 Phenylpropanoid CSE medium pass
OBART01G14580.1 Phenylpropanoid CSE medium pass
OBART01G22600.1 Phenylpropanoid CSE medium pass
OBART01G22610.1 Phenylpropanoid CSE medium pass
OBART01G27020.1 Phenylpropanoid CSE medium pass
OBART01G40140.1 Phenylpropanoid CSE low borderline
OBART01G40140.2 Phenylpropanoid CSE low borderline
OBART01G41110.1 Phenylpropanoid CSE medium pass
OBART01G45380.1 Phenylpropanoid CSE medium pass
OBART02G08130.1 Phenylpropanoid CSE medium pass
OBART02G16360.1 Phenylpropanoid CSE medium pass
OBART02G30130.1 Phenylpropanoid CSE medium pass
OBART04G04160.1 Phenylpropanoid CSE medium pass
OBART04G04180.1 Phenylpropanoid CSE low borderline
OBART04G07190.1 Phenylpropanoid CSE medium pass
OBART04G27610.1 Phenylpropanoid CSE medium pass
OBART04G29040.1 Phenylpropanoid CSE medium pass
OBART04G29060.1 Phenylpropanoid CSE medium pass
OBART05G00610.1 Phenylpropanoid CSE medium pass
OBART05G13480.1 Phenylpropanoid CSE medium pass
OBART05G13480.2 Phenylpropanoid CSE medium pass
OBART05G28240.1 Phenylpropanoid CSE medium pass
OBART07G00680.1 Phenylpropanoid CSE low borderline