PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

2196
Candidate Protein Records
1727
Pathway-Level Records
4621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
OBART07G07350.1 Terpenoid CYP76 medium pass
OBART07G10640.1 Terpenoid CYP76 low borderline
OBART07G12970.1 Terpenoid CYP76 low borderline
OBART07G12980.1 Terpenoid CYP76 low borderline
OBART07G14860.1 Terpenoid CYP76 low borderline
OBART07G16310.1 Terpenoid CYP76 low borderline
OBART07G21420.1 Terpenoid CYP76 medium pass
OBART08G00400.1 Terpenoid CYP76 medium borderline
OBART08G00410.1 Terpenoid CYP76 medium borderline
OBART08G01970.1 Terpenoid CYP76 low borderline
OBART08G03080.1 Terpenoid CYP76 low borderline
OBART08G06550.1 Terpenoid CYP76 medium borderline
OBART08G17080.1 Terpenoid CYP76 medium pass
OBART08G17500.1 Terpenoid CYP76 medium pass
OBART08G19870.1 Terpenoid CYP76 medium borderline
OBART08G19890.1 Terpenoid CYP76 medium pass
OBART08G19910.1 Terpenoid CYP76 medium pass
OBART08G19920.1 Terpenoid CYP76 low borderline
OBART08G22600.1 Terpenoid CYP76 medium pass
OBART08G22660.1 Terpenoid CYP76 medium pass
OBART09G02750.1 Terpenoid CYP76 medium borderline
OBART09G02770.1 Terpenoid CYP76 medium borderline
OBART09G11770.1 Terpenoid CYP76 medium borderline
OBART09G11780.1 Terpenoid CYP76 medium pass
OBART09G11790.1 Terpenoid CYP76 medium borderline
OBART09G11790.2 Terpenoid CYP76 medium borderline
OBART09G11800.1 Terpenoid CYP76 medium borderline
OBART09G12160.1 Terpenoid CYP76 low borderline
OBART10G01970.1 Terpenoid CYP76 medium pass
OBART10G02230.1 Terpenoid CYP76 medium borderline
OBART10G03440.1 Terpenoid CYP76 medium borderline
OBART10G03460.1 Terpenoid CYP76 medium borderline
OBART10G03490.1 Terpenoid CYP76 medium pass
OBART10G03550.1 Terpenoid CYP76 medium borderline
OBART10G03820.1 Terpenoid CYP76 medium pass
OBART10G03820.2 Terpenoid CYP76 medium borderline
OBART10G04360.1 Terpenoid CYP76 medium borderline
OBART10G04820.1 Terpenoid CYP76 low borderline
OBART10G04830.1 Terpenoid CYP76 medium pass
OBART10G05550.1 Terpenoid CYP76 medium borderline
OBART10G05570.1 Terpenoid CYP76 medium borderline
OBART10G06900.1 Terpenoid CYP76 medium pass
OBART10G08170.1 Terpenoid CYP76 low borderline
OBART10G08170.2 Terpenoid CYP76 low borderline
OBART10G15460.1 Terpenoid CYP76 low borderline
OBART10G15510.1 Terpenoid CYP76 medium pass
OBART10G15590.1 Terpenoid CYP76 medium pass
OBART10G15600.1 Terpenoid CYP76 low borderline
OBART10G15620.1 Terpenoid CYP76 medium pass
OBART10G15630.1 Terpenoid CYP76 medium pass