PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

2196
Candidate Protein Records
1727
Pathway-Level Records
4621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
OBART12G07740.1 Flavonoid IFR medium pass
OBART12G07770.1 Flavonoid IFR high pass
OBART12G07830.1 Flavonoid IFR high pass
OBART12G09940.1 Flavonoid IFR low borderline
OBART01G06210.1 Flavonoid IFS low borderline
OBART01G07100.1 Flavonoid IFS low borderline
OBART01G19690.1 Flavonoid IFS medium borderline
OBART01G21840.1 Flavonoid IFS low borderline
OBART01G21840.2 Flavonoid IFS low borderline
OBART01G23440.1 Flavonoid IFS low borderline
OBART01G23450.1 Flavonoid IFS low borderline
OBART01G23450.2 Flavonoid IFS low borderline
OBART01G23460.4 Flavonoid IFS low borderline
OBART01G23470.1 Flavonoid IFS low borderline
OBART01G29620.1 Flavonoid IFS low borderline
OBART01G34240.1 Flavonoid IFS low borderline
OBART01G34250.2 Flavonoid IFS low borderline
OBART01G37690.1 Flavonoid IFS low borderline
OBART01G37920.1 Flavonoid IFS low borderline
OBART01G44030.1 Flavonoid IFS low borderline
OBART02G06380.1 Flavonoid IFS medium borderline
OBART02G06380.2 Flavonoid IFS medium borderline
OBART02G06480.1 Flavonoid IFS medium borderline
OBART02G14540.1 Flavonoid IFS low borderline
OBART02G17550.1 Flavonoid IFS medium borderline
OBART02G21170.1 Flavonoid IFS medium borderline
OBART02G21200.1 Flavonoid IFS medium borderline
OBART02G21240.1 Flavonoid IFS medium borderline
OBART02G21340.1 Flavonoid IFS medium borderline
OBART02G27120.1 Flavonoid IFS low borderline
OBART02G29320.1 Flavonoid IFS low borderline
OBART02G37380.1 Flavonoid IFS low borderline
OBART02G37380.2 Flavonoid IFS low borderline
OBART02G37380.3 Flavonoid IFS low borderline
OBART02G37380.4 Flavonoid IFS low borderline
OBART02G37380.5 Flavonoid IFS low borderline
OBART02G37380.6 Flavonoid IFS low borderline
OBART02G37850.1 Flavonoid IFS low borderline
OBART03G00990.1 Flavonoid IFS medium borderline
OBART03G02740.1 Flavonoid IFS medium borderline
OBART03G03020.1 Flavonoid IFS low borderline
OBART03G03130.1 Flavonoid IFS low borderline
OBART03G03140.1 Flavonoid IFS low borderline
OBART03G03160.1 Flavonoid IFS low borderline
OBART03G03170.1 Flavonoid IFS low borderline
OBART03G05120.1 Flavonoid IFS low borderline
OBART03G08890.1 Flavonoid IFS low borderline
OBART03G09250.1 Flavonoid IFS low borderline
OBART03G10580.1 Flavonoid IFS medium borderline
OBART03G18460.1 Flavonoid IFS medium borderline