PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

2196
Candidate Protein Records
1727
Pathway-Level Records
4621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
OBART08G22600.1 Flavonoid FNS medium borderline
OBART09G07510.1 Flavonoid FNS low borderline
OBART09G17380.1 Flavonoid FNS medium borderline
OBART10G08170.1 Flavonoid FNS medium borderline
OBART10G08170.2 Flavonoid FNS medium borderline
OBART10G15460.1 Flavonoid FNS medium borderline
OBART10G15510.1 Flavonoid FNS medium borderline
OBART11G13630.1 Flavonoid FNS medium borderline
OBART11G15310.1 Flavonoid FNS medium borderline
OBART11G20600.1 Flavonoid FNS medium borderline
OBART12G20240.1 Flavonoid FNS medium borderline
OBART01G00440.1 Flavonoid IFR high pass
OBART01G00450.1 Flavonoid IFR high pass
OBART01G08720.1 Flavonoid IFR high pass
OBART01G08730.1 Flavonoid IFR high pass
OBART01G13180.1 Flavonoid IFR low borderline
OBART02G03100.1 Flavonoid IFR low borderline
OBART02G09910.1 Flavonoid IFR low borderline
OBART02G09910.2 Flavonoid IFR low borderline
OBART02G09910.3 Flavonoid IFR low borderline
OBART02G20520.1 Flavonoid IFR low borderline
OBART02G29440.1 Flavonoid IFR high pass
OBART02G37290.1 Flavonoid IFR low borderline
OBART02G37930.1 Flavonoid IFR low borderline
OBART02G38570.1 Flavonoid IFR low borderline
OBART03G06220.1 Flavonoid IFR medium borderline
OBART03G11230.1 Flavonoid IFR high pass
OBART03G17340.1 Flavonoid IFR medium pass
OBART03G17640.1 Flavonoid IFR low borderline
OBART03G39180.1 Flavonoid IFR low borderline
OBART04G11380.1 Flavonoid IFR low borderline
OBART05G00750.1 Flavonoid IFR low borderline
OBART05G08310.1 Flavonoid IFR high pass
OBART05G09620.1 Flavonoid IFR high pass
OBART05G13490.1 Flavonoid IFR low borderline
OBART06G14420.1 Flavonoid IFR low borderline
OBART06G14780.1 Flavonoid IFR high pass
OBART06G15080.1 Flavonoid IFR high pass
OBART06G26690.1 Flavonoid IFR low borderline
OBART07G05000.1 Flavonoid IFR low borderline
OBART07G07170.1 Flavonoid IFR low borderline
OBART07G07170.2 Flavonoid IFR low borderline
OBART07G26090.1 Flavonoid IFR low borderline
OBART08G23080.1 Flavonoid IFR medium pass
OBART09G17140.1 Flavonoid IFR low borderline
OBART10G00010.1 Flavonoid IFR low borderline
OBART10G04920.1 Flavonoid IFR low borderline
OBART10G10070.1 Flavonoid IFR low borderline
OBART10G10070.2 Flavonoid IFR low borderline
OBART12G07730.1 Flavonoid IFR high pass