PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

2196
Candidate Protein Records
1727
Pathway-Level Records
4621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
OBART10G16180.4 Flavonoid F3H low borderline
OBART10G16180.5 Flavonoid F3H low borderline
OBART10G16190.1 Flavonoid F3H low borderline
OBART10G16250.1 Flavonoid F3H low borderline
OBART10G16970.1 Flavonoid F3H medium borderline
OBART10G18280.1 Flavonoid F3H medium borderline
OBART10G18290.1 Flavonoid F3H medium borderline
OBART10G18310.1 Flavonoid F3H medium borderline
OBART10G18320.1 Flavonoid F3H medium borderline
OBART10G18340.1 Flavonoid F3H medium borderline
OBART10G18360.1 Flavonoid F3H low borderline
OBART10G18370.1 Flavonoid F3H low borderline
OBART10G18390.1 Flavonoid F3H medium borderline
OBART10G18410.1 Flavonoid F3H medium borderline
OBART11G05390.1 Flavonoid F3H medium borderline
OBART11G09110.1 Flavonoid F3H low borderline
OBART11G11910.1 Flavonoid F3H medium borderline
OBART01G18730.1 Flavonoid FLS medium borderline
OBART03G22690.1 Flavonoid FLS medium borderline
OBART03G31630.1 Flavonoid FLS low borderline
OBART06G23670.1 Flavonoid FLS low borderline
OBART10G18350.1 Flavonoid FLS medium pass
OBART01G07110.1 Flavonoid FNS low borderline
OBART01G07980.1 Flavonoid FNS medium borderline
OBART01G08000.1 Flavonoid FNS medium borderline
OBART01G14730.1 Flavonoid FNS medium borderline
OBART01G44040.1 Flavonoid FNS medium borderline
OBART02G05540.1 Flavonoid FNS medium borderline
OBART02G05540.2 Flavonoid FNS medium borderline
OBART02G05540.3 Flavonoid FNS medium borderline
OBART02G09090.1 Flavonoid FNS medium borderline
OBART02G17540.2 Flavonoid FNS medium borderline
OBART02G27650.1 Flavonoid FNS medium borderline
OBART03G22840.1 Flavonoid FNS medium borderline
OBART03G34950.1 Flavonoid FNS medium borderline
OBART03G40080.1 Flavonoid FNS medium borderline
OBART04G01300.1 Flavonoid FNS medium borderline
OBART05G05430.1 Flavonoid FNS medium borderline
OBART05G13350.1 Flavonoid FNS medium borderline
OBART05G16580.1 Flavonoid FNS medium borderline
OBART05G16590.1 Flavonoid FNS medium borderline
OBART05G22660.1 Flavonoid FNS medium borderline
OBART06G18780.1 Flavonoid FNS medium borderline
OBART06G18930.1 Flavonoid FNS medium borderline
OBART06G18930.2 Flavonoid FNS medium borderline
OBART06G18990.1 Flavonoid FNS medium borderline
OBART07G12980.1 Flavonoid FNS medium borderline
OBART07G16410.1 Flavonoid FNS medium borderline
OBART07G19050.1 Flavonoid FNS medium borderline
OBART08G08160.1 Flavonoid FNS medium borderline