PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

1727
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Gene Pathway Family Confidence Status
OBART03G05120.1 Steroid BR6OX2/CYP85A2 low borderline
OBART03G10590.1 Steroid BR6OX2/CYP85A2 low borderline
OBART03G15050.1 Steroid BR6OX2/CYP85A2 low borderline
OBART03G24910.1 Steroid BR6OX2/CYP85A2 low borderline
OBART03G27760.1 Steroid BR6OX2/CYP85A2 low borderline
OBART03G30500.1 Steroid BR6OX2/CYP85A2 low borderline
OBART04G00070.1 Steroid BR6OX2/CYP85A2 low borderline
OBART04G02870.1 Steroid BR6OX2/CYP85A2 low borderline
OBART04G22350.1 Steroid BR6OX2/CYP85A2 low borderline
OBART05G05430.1 Steroid BR6OX2/CYP85A2 low borderline
OBART05G18300.1 Steroid BR6OX2/CYP85A2 low borderline
OBART05G21360.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G01780.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G12960.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G13110.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G14120.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G14630.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G15950.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G16210.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G18780.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G18950.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G18970.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G20970.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G22330.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G22330.2 Steroid BR6OX2/CYP85A2 low borderline
OBART06G22390.1 Steroid BR6OX2/CYP85A2 low borderline
OBART06G22430.1 Steroid BR6OX2/CYP85A2 low borderline
OBART07G12970.1 Steroid BR6OX2/CYP85A2 low borderline
OBART07G12980.1 Steroid BR6OX2/CYP85A2 low borderline
OBART07G24110.1 Steroid BR6OX2/CYP85A2 low borderline
OBART08G00400.1 Steroid BR6OX2/CYP85A2 low borderline
OBART08G00410.1 Steroid BR6OX2/CYP85A2 low borderline
OBART08G00430.1 Steroid BR6OX2/CYP85A2 low borderline
OBART08G00450.1 Steroid BR6OX2/CYP85A2 low borderline
OBART08G00470.1 Steroid BR6OX2/CYP85A2 low borderline
OBART08G01970.1 Steroid BR6OX2/CYP85A2 low borderline
OBART08G03080.1 Steroid BR6OX2/CYP85A2 low borderline
OBART08G08130.1 Steroid BR6OX2/CYP85A2 low borderline
OBART08G17500.1 Steroid BR6OX2/CYP85A2 low borderline
OBART08G19870.1 Steroid BR6OX2/CYP85A2 low borderline
OBART08G19910.1 Steroid BR6OX2/CYP85A2 low borderline
OBART08G22600.1 Steroid BR6OX2/CYP85A2 low borderline
OBART09G02750.1 Steroid BR6OX2/CYP85A2 low borderline
OBART09G02770.1 Steroid BR6OX2/CYP85A2 low borderline
OBART09G03240.1 Steroid BR6OX2/CYP85A2 low borderline
OBART09G11770.1 Steroid BR6OX2/CYP85A2 low borderline
OBART09G11790.1 Steroid BR6OX2/CYP85A2 low borderline
OBART09G11790.2 Steroid BR6OX2/CYP85A2 low borderline
OBART09G11800.1 Steroid BR6OX2/CYP85A2 low borderline
OBART09G12160.1 Steroid BR6OX2/CYP85A2 low borderline