PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

2196
Candidate Protein Records
1727
Pathway-Level Records
4621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
OBART04G01300.1 Steroid CYP90D1 low borderline
OBART04G15600.1 Steroid CYP90D1 medium borderline
OBART04G22110.1 Steroid CYP90D1 medium borderline
OBART05G16020.1 Steroid CYP90D1 low borderline
OBART05G16020.2 Steroid CYP90D1 low borderline
OBART05G20560.1 Steroid CYP90D1 low borderline
OBART06G00070.1 Steroid CYP90D1 low borderline
OBART07G16320.1 Steroid CYP90D1 medium borderline
OBART07G16400.3 Steroid CYP90D1 medium pass
OBART07G16410.1 Steroid CYP90D1 low borderline
OBART07G21420.1 Steroid CYP90D1 low borderline
OBART07G26500.1 Steroid CYP90D1 low borderline
OBART08G15450.1 Steroid CYP90D1 low borderline
OBART08G19890.1 Steroid CYP90D1 low borderline
OBART10G03820.1 Steroid CYP90D1 low borderline
OBART10G03820.2 Steroid CYP90D1 low borderline
OBART10G06900.1 Steroid CYP90D1 low borderline
OBART10G15630.1 Steroid CYP90D1 medium borderline
OBART11G02640.1 Steroid CYP90D1 medium borderline
OBART12G01000.1 Steroid CYP90D1 low borderline
OBART12G01000.2 Steroid CYP90D1 low borderline
OBART12G02340.1 Steroid CYP90D1 medium borderline
OBART01G03290.1 Steroid DET2 low borderline
OBART10G12180.1 Steroid DET2 medium pass
OBART11G05150.1 Steroid DET2 medium pass
OBART11G05150.2 Steroid DET2 medium pass
OBART11G05180.1 Steroid DET2 medium pass
OBART03G25160.1 Steroid DWF1 low borderline
OBART07G25900.1 Steroid DWF1 low borderline
OBART10G09010.1 Steroid DWF1 medium pass
OBART10G10680.1 Steroid DWF1 low borderline
OBART01G07090.1 Steroid DWF4/CYP90B1 low borderline
OBART01G07100.1 Steroid DWF4/CYP90B1 low borderline
OBART01G07110.1 Steroid DWF4/CYP90B1 medium borderline
OBART01G07980.1 Steroid DWF4/CYP90B1 low borderline
OBART01G14710.1 Steroid DWF4/CYP90B1 low borderline
OBART01G21840.1 Steroid DWF4/CYP90B1 low borderline
OBART01G21840.2 Steroid DWF4/CYP90B1 low borderline
OBART01G23440.1 Steroid DWF4/CYP90B1 low borderline
OBART01G23450.1 Steroid DWF4/CYP90B1 low borderline
OBART01G23450.2 Steroid DWF4/CYP90B1 low borderline
OBART01G23460.1 Steroid DWF4/CYP90B1 low borderline
OBART01G23460.2 Steroid DWF4/CYP90B1 low borderline
OBART01G23460.3 Steroid DWF4/CYP90B1 low borderline
OBART01G23460.4 Steroid DWF4/CYP90B1 low borderline
OBART01G23470.1 Steroid DWF4/CYP90B1 low borderline
OBART01G29620.1 Steroid DWF4/CYP90B1 low borderline
OBART01G34240.1 Steroid DWF4/CYP90B1 low borderline
OBART01G34250.1 Steroid DWF4/CYP90B1 low borderline
OBART01G37920.1 Steroid DWF4/CYP90B1 low borderline