PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

1727
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Gene Pathway Family Confidence Status
OBART07G16380.2 Steroid CPD/CYP90A1 medium borderline
OBART08G08160.1 Steroid CPD/CYP90A1 medium borderline
OBART08G22660.1 Steroid CPD/CYP90A1 medium borderline
OBART10G03550.1 Steroid CPD/CYP90A1 medium borderline
OBART10G03590.1 Steroid CPD/CYP90A1 low borderline
OBART10G03590.2 Steroid CPD/CYP90A1 low borderline
OBART10G17620.1 Steroid CPD/CYP90A1 medium borderline
OBART11G10470.1 Steroid CPI1 high pass
OBART01G08010.1 Steroid CYP51G1 medium borderline
OBART01G15960.1 Steroid CYP51G1 medium borderline
OBART01G27770.1 Steroid CYP51G1 medium borderline
OBART01G44410.1 Steroid CYP51G1 medium borderline
OBART01G44830.1 Steroid CYP51G1 low borderline
OBART02G00970.1 Steroid CYP51G1 medium borderline
OBART02G06400.1 Steroid CYP51G1 medium borderline
OBART02G06420.1 Steroid CYP51G1 medium borderline
OBART02G06450.1 Steroid CYP51G1 medium borderline
OBART02G06450.2 Steroid CYP51G1 medium borderline
OBART02G06450.3 Steroid CYP51G1 medium borderline
OBART02G14540.1 Steroid CYP51G1 medium borderline
OBART02G19750.1 Steroid CYP51G1 low borderline
OBART02G23050.1 Steroid CYP51G1 medium borderline
OBART05G07060.1 Steroid CYP51G1 medium borderline
OBART05G13350.1 Steroid CYP51G1 medium borderline
OBART05G16580.1 Steroid CYP51G1 medium borderline
OBART05G16590.1 Steroid CYP51G1 medium borderline
OBART05G16600.1 Steroid CYP51G1 medium borderline
OBART05G17120.1 Steroid CYP51G1 medium borderline
OBART05G22660.1 Steroid CYP51G1 medium borderline
OBART06G10230.1 Steroid CYP51G1 medium borderline
OBART06G22350.1 Steroid CYP51G1 medium borderline
OBART06G22400.1 Steroid CYP51G1 medium borderline
OBART06G22410.1 Steroid CYP51G1 medium borderline
OBART06G22440.1 Steroid CYP51G1 medium borderline
OBART07G13550.1 Steroid CYP51G1 medium pass
OBART07G13570.1 Steroid CYP51G1 medium borderline
OBART07G17810.1 Steroid CYP51G1 low borderline
OBART07G19050.1 Steroid CYP51G1 medium borderline
OBART07G19070.1 Steroid CYP51G1 low borderline
OBART08G00420.1 Steroid CYP51G1 medium borderline
OBART10G15510.1 Steroid CYP51G1 medium borderline
OBART11G15310.1 Steroid CYP51G1 medium borderline
OBART01G16440.1 Steroid CYP90D1 low borderline
OBART02G16220.1 Steroid CYP90D1 low borderline
OBART02G16230.1 Steroid CYP90D1 low borderline
OBART03G00990.1 Steroid CYP90D1 low borderline
OBART03G10680.1 Steroid CYP90D1 low borderline
OBART03G16200.1 Steroid CYP90D1 low borderline
OBART03G16200.2 Steroid CYP90D1 low borderline
OBART03G25440.1 Steroid CYP90D1 medium borderline