PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

1727
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
OBART04G02860.2 Steroid CAS medium pass
OBART04G02920.1 Steroid CAS medium pass
OBART04G07950.1 Steroid CAS low borderline
OBART04G08030.1 Steroid CAS low borderline
OBART04G08130.1 Steroid CAS low borderline
OBART04G08170.1 Steroid CAS low borderline
OBART04G25420.1 Steroid CAS low borderline
OBART04G25420.2 Steroid CAS low borderline
OBART05G08300.1 Steroid CAS medium pass
OBART06G03290.1 Steroid CAS medium pass
OBART06G03290.2 Steroid CAS medium pass
OBART06G03300.1 Steroid CAS medium pass
OBART06G15240.1 Steroid CAS medium pass
OBART06G15240.2 Steroid CAS medium pass
OBART06G15240.3 Steroid CAS medium pass
OBART06G15240.4 Steroid CAS medium pass
OBART06G18730.1 Steroid CAS medium pass
OBART06G18740.1 Steroid CAS medium pass
OBART06G18750.1 Steroid CAS medium pass
OBART08G06410.1 Steroid CAS medium pass
OBART09G05090.1 Steroid CAS medium pass
OBART09G05170.1 Steroid CAS low borderline
OBART11G05470.1 Steroid CAS medium pass
OBART11G09820.1 Steroid CAS medium pass
OBART11G09850.1 Steroid CAS medium pass
OBART11G09850.2 Steroid CAS medium pass
OBART11G09850.3 Steroid CAS medium pass
OBART11G09850.4 Steroid CAS medium pass
OBART11G09850.5 Steroid CAS medium pass
OBART11G09850.6 Steroid CAS medium pass
OBART11G13300.1 Steroid CAS low borderline
OBART11G13300.2 Steroid CAS low borderline
OBART11G13300.3 Steroid CAS low borderline
OBART11G13300.4 Steroid CAS low borderline
OBART11G13300.5 Steroid CAS low borderline
OBART11G17250.1 Steroid CAS medium pass
OBART12G12590.1 Steroid CAS medium pass
OBART12G12600.1 Steroid CAS low borderline
OBART12G19390.1 Steroid CAS medium pass
OBART01G05440.1 Steroid CPD/CYP90A1 low borderline
OBART01G34250.2 Steroid CPD/CYP90A1 low borderline
OBART01G44030.1 Steroid CPD/CYP90A1 low borderline
OBART03G08890.1 Steroid CPD/CYP90A1 low borderline
OBART03G18840.2 Steroid CPD/CYP90A1 low borderline
OBART03G23580.1 Steroid CPD/CYP90A1 low borderline
OBART06G11550.1 Steroid CPD/CYP90A1 medium borderline
OBART07G14860.1 Steroid CPD/CYP90A1 medium borderline
OBART07G16340.1 Steroid CPD/CYP90A1 medium borderline
OBART07G16370.1 Steroid CPD/CYP90A1 medium borderline
OBART07G16380.1 Steroid CPD/CYP90A1 medium borderline