PlantSME Plant secondary metabolism enzyme database

Oryza nivara (oryza_nivara)

Imported from atlas release summary for Oryza nivara.

2400
Candidate Protein Records
1919
Pathway-Level Records
5100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 573 19 BAHD (237) View species results
Alkaloid pathway 445 24 7DLGT (78) View species results
Phenylpropanoid pathway 308 12 POD (101) View species results
Flavonoid pathway 306 13 UFGT (191) View species results
Rosmarinic acid pathway 150 7 C4H (77) View species results
Steroid pathway 137 13 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 401 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ONIVA11G09840.3 Steroid CAS medium pass
ONIVA11G09840.4 Steroid CAS medium pass
ONIVA11G17220.1 Steroid CAS medium pass
ONIVA12G12630.1 Steroid CAS low borderline
ONIVA12G12630.2 Steroid CAS medium pass
ONIVA12G12630.3 Steroid CAS low borderline
ONIVA12G18300.1 Steroid CAS medium pass
ONIVA01G39070.1 Steroid CPD/CYP90A1 low borderline
ONIVA01G39070.2 Steroid CPD/CYP90A1 low borderline
ONIVA02G23330.1 Steroid CPD/CYP90A1 medium borderline
ONIVA02G26660.1 Steroid CPD/CYP90A1 low borderline
ONIVA03G25250.1 Steroid CPD/CYP90A1 low borderline
ONIVA04G27320.1 Steroid CPD/CYP90A1 low borderline
ONIVA06G01070.1 Steroid CPD/CYP90A1 low borderline
ONIVA06G13170.1 Steroid CPD/CYP90A1 medium borderline
ONIVA06G14720.1 Steroid CPD/CYP90A1 low borderline
ONIVA07G14660.1 Steroid CPD/CYP90A1 medium borderline
ONIVA07G14680.2 Steroid CPD/CYP90A1 medium borderline
ONIVA08G25750.1 Steroid CPD/CYP90A1 medium borderline
ONIVA09G07550.1 Steroid CPD/CYP90A1 medium borderline
ONIVA10G19870.1 Steroid CPD/CYP90A1 medium borderline
ONIVA10G19870.2 Steroid CPD/CYP90A1 medium borderline
ONIVA10G19870.3 Steroid CPD/CYP90A1 medium borderline
ONIVA10G19870.4 Steroid CPD/CYP90A1 medium borderline
ONIVA10G19870.5 Steroid CPD/CYP90A1 medium borderline
ONIVA10G19870.6 Steroid CPD/CYP90A1 medium borderline
ONIVA11G05040.1 Steroid CPD/CYP90A1 low borderline
ONIVA12G01820.1 Steroid CPD/CYP90A1 medium borderline
ONIVA12G06340.1 Steroid CPD/CYP90A1 low borderline
ONIVA12G10660.1 Steroid CPD/CYP90A1 low borderline
ONIVA11G10560.1 Steroid CPI1 high pass
ONIVA01G00020.1 Steroid CYP51G1 medium borderline
ONIVA01G00060.1 Steroid CYP51G1 medium borderline
ONIVA01G10270.1 Steroid CYP51G1 medium borderline
ONIVA01G10270.2 Steroid CYP51G1 medium borderline
ONIVA01G10310.1 Steroid CYP51G1 medium borderline
ONIVA01G10480.1 Steroid CYP51G1 medium borderline
ONIVA01G10500.1 Steroid CYP51G1 medium borderline
ONIVA01G18080.1 Steroid CYP51G1 medium borderline
ONIVA01G50580.1 Steroid CYP51G1 medium borderline
ONIVA01G50580.2 Steroid CYP51G1 medium borderline
ONIVA01G50580.3 Steroid CYP51G1 medium borderline
ONIVA01G51040.1 Steroid CYP51G1 low borderline
ONIVA02G00890.1 Steroid CYP51G1 medium borderline
ONIVA02G07450.1 Steroid CYP51G1 medium borderline
ONIVA02G07470.1 Steroid CYP51G1 medium borderline
ONIVA02G07470.2 Steroid CYP51G1 medium borderline
ONIVA02G07470.3 Steroid CYP51G1 medium borderline
ONIVA02G15760.1 Steroid CYP51G1 medium borderline
ONIVA04G21770.1 Steroid CYP51G1 medium borderline