PlantSME Plant secondary metabolism enzyme database

Oryza nivara (oryza_nivara)

Imported from atlas release summary for Oryza nivara.

2400
Candidate Protein Records
1919
Pathway-Level Records
5100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 573 19 BAHD (237) View species results
Alkaloid pathway 445 24 7DLGT (78) View species results
Phenylpropanoid pathway 308 12 POD (101) View species results
Flavonoid pathway 306 13 UFGT (191) View species results
Rosmarinic acid pathway 150 7 C4H (77) View species results
Steroid pathway 137 13 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 401 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ONIVA01G34340.1 Terpenoid UGT medium pass
ONIVA01G34350.1 Terpenoid UGT medium pass
ONIVA01G34400.1 Terpenoid UGT medium pass
ONIVA01G43040.1 Terpenoid UGT medium pass
ONIVA01G43520.1 Terpenoid UGT medium pass
ONIVA01G49720.1 Terpenoid UGT low borderline
ONIVA01G49720.3 Terpenoid UGT low borderline
ONIVA02G03980.1 Terpenoid UGT medium pass
ONIVA02G08240.1 Terpenoid UGT medium pass
ONIVA02G09420.1 Terpenoid UGT medium pass
ONIVA02G09620.1 Terpenoid UGT low borderline
ONIVA02G09630.1 Terpenoid UGT medium pass
ONIVA02G09650.1 Terpenoid UGT medium pass
ONIVA02G09660.1 Terpenoid UGT medium pass
ONIVA02G09670.1 Terpenoid UGT medium pass
ONIVA02G11320.1 Terpenoid UGT medium pass
ONIVA02G11340.1 Terpenoid UGT medium pass
ONIVA02G11350.1 Terpenoid UGT medium pass
ONIVA02G11360.1 Terpenoid UGT medium pass
ONIVA02G11380.1 Terpenoid UGT medium pass
ONIVA02G11400.1 Terpenoid UGT medium pass
ONIVA02G11400.2 Terpenoid UGT medium pass
ONIVA02G12300.1 Terpenoid UGT medium pass
ONIVA02G16140.1 Terpenoid UGT medium pass
ONIVA02G20120.1 Terpenoid UGT medium pass
ONIVA02G23960.1 Terpenoid UGT medium pass
ONIVA02G23990.1 Terpenoid UGT medium pass
ONIVA02G24000.1 Terpenoid UGT medium pass
ONIVA02G27530.1 Terpenoid UGT low borderline
ONIVA02G30110.1 Terpenoid UGT medium pass
ONIVA02G30130.1 Terpenoid UGT medium pass
ONIVA02G30190.1 Terpenoid UGT medium pass
ONIVA02G35140.1 Terpenoid UGT medium pass
ONIVA02G35150.1 Terpenoid UGT medium pass
ONIVA02G35170.1 Terpenoid UGT medium pass
ONIVA02G38380.1 Terpenoid UGT medium pass
ONIVA03G05900.1 Terpenoid UGT medium pass
ONIVA03G06160.1 Terpenoid UGT medium pass
ONIVA03G08930.1 Terpenoid UGT medium pass
ONIVA03G10530.1 Terpenoid UGT low borderline
ONIVA03G18890.1 Terpenoid UGT medium pass
ONIVA03G23660.1 Terpenoid UGT medium pass
ONIVA03G23670.1 Terpenoid UGT low borderline
ONIVA03G23670.2 Terpenoid UGT medium pass
ONIVA03G26300.1 Terpenoid UGT medium pass
ONIVA03G26310.1 Terpenoid UGT medium pass
ONIVA03G29790.1 Terpenoid UGT medium pass
ONIVA03G31710.1 Terpenoid UGT medium pass
ONIVA03G32330.1 Terpenoid UGT medium pass
ONIVA03G32340.1 Terpenoid UGT medium pass