PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status Best Target
Pnig01G0006560 Alkaloid 7DLH low borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig02G0011520 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig03G0010410 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0015320 Alkaloid 7DLH low borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0029390 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0029430 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0029690 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0029760 Alkaloid 7DLH medium pass 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0032700 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0032720 Alkaloid 7DLH medium pass 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0032800 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig06G0014680 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig06G0014710 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig06G0014740 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig07G0015980 Alkaloid 7DLH low borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig08G0003020 Alkaloid 7DLH medium pass 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig10G0007360 Alkaloid 7DLH medium pass 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig13G0018310 Alkaloid 7DLH low borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig16G0011350 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig18G0000880 Alkaloid 7DLH medium pass 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig18G0001010 Alkaloid 7DLH low borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig18G0001050 Alkaloid 7DLH low borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig18G0001280 Alkaloid 7DLH low borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig18G0001330 Alkaloid 7DLH medium pass 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig18G0012230 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig24G0008330 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig24G0008340 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO