PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX1/CYP85A1
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Gene Pathway Family Confidence Status Best Target
Pnig02G0021740 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00002__sp_Q43147_C85A1_SOLLC
Pnig02G0027920 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00001__sp_I1GQE7_C85A1_BRADI
Pnig02G0031910 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig03G0017040 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00002__sp_Q43147_C85A1_SOLLC
Pnig03G0024130 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00002__sp_Q43147_C85A1_SOLLC
Pnig03G0024490 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00001__sp_I1GQE7_C85A1_BRADI
Pnig03G0031930 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig04G0002900 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00001__sp_I1GQE7_C85A1_BRADI
Pnig04G0025250 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00001__sp_I1GQE7_C85A1_BRADI
Pnig04G0026370 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig04G0026380 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00001__sp_I1GQE7_C85A1_BRADI
Pnig05G0033260 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00004__sp_Q9FMA5_C85A1_ARATH
Pnig05G0033380 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00001__sp_I1GQE7_C85A1_BRADI
Pnig05G0033420 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00001__sp_I1GQE7_C85A1_BRADI
Pnig08G0001850 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00002__sp_Q43147_C85A1_SOLLC
Pnig08G0009140 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig10G0017960 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig11G0000460 Steroid BR6OX1/CYP85A1 medium pass BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig11G0014480 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00001__sp_I1GQE7_C85A1_BRADI
Pnig11G0021520 Steroid BR6OX1/CYP85A1 medium pass BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig12G0003300 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00001__sp_I1GQE7_C85A1_BRADI
Pnig12G0004040 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig12G0004050 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig12G0004070 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00004__sp_Q9FMA5_C85A1_ARATH
Pnig12G0004080 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig12G0004120 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig12G0011290 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig12G0011360 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig12G0011370 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00004__sp_Q9FMA5_C85A1_ARATH
Pnig12G0011390 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig13G0013840 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig13G0014200 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ
Pnig15G0002610 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00004__sp_Q9FMA5_C85A1_ARATH
Pnig15G0006120 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00002__sp_Q43147_C85A1_SOLLC
Pnig15G0006420 Steroid BR6OX1/CYP85A1 low borderline BR6OX1_CYP85A1__00002__sp_Q43147_C85A1_SOLLC
Pnig16G0004280 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00002__sp_Q43147_C85A1_SOLLC
Pnig17G0002130 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00002__sp_Q43147_C85A1_SOLLC
Pnig18G0010560 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00002__sp_Q43147_C85A1_SOLLC
Pnig18G0014340 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00002__sp_Q43147_C85A1_SOLLC
Pnig23G0014150 Steroid BR6OX1/CYP85A1 medium borderline BR6OX1_CYP85A1__00003__sp_Q8GSQ1_C85A1_ORYSJ