PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
Reset
Gene Pathway Family Confidence Status Best Target
Pnig01G0011870 Alkaloid NCS low borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig01G0022430 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig01G0031400 Alkaloid NCS medium pass NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig01G0034850 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig01G0036410 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig02G0016990 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Pnig02G0027870 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig02G0038110 Alkaloid NCS low borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig02G0038140 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig03G0000790 Alkaloid NCS low borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig03G0000810 Alkaloid NCS low borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig05G0017340 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig05G0017350 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig05G0017360 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig05G0017380 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig05G0017390 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig05G0017480 Alkaloid NCS low borderline NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig05G0017490 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig05G0017500 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig05G0017520 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig05G0017530 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig05G0017550 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig05G0021700 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Pnig05G0021710 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
Pnig07G0016450 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig07G0016460 Alkaloid NCS low borderline NCS__00005__sp_Q67A25_NCS_THLFG
Pnig07G0016480 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig07G0022870 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Pnig07G0022880 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Pnig08G0006980 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig09G0003130 Alkaloid NCS low borderline NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Pnig09G0003150 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Pnig10G0013940 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig13G0016800 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig16G0013070 Alkaloid NCS low borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig18G0018070 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig18G0018100 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig18G0018110 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig18G0018840 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig21G0007910 Alkaloid NCS low borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig22G0005450 Alkaloid NCS low borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig22G0005460 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Pnig25G0017400 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO