PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
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Gene Pathway Family Confidence Status Best Target
Pnig01G0030980 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig02G0008300 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig04G0010180 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig04G0024270 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig04G0029850 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig05G0009830 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig07G0009040 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig07G0009250 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig08G0019040 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig12G0006480 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig12G0006490 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig13G0016280 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig14G0010090 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig26G0004540 Alkaloid 8HGO low borderline 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig26G0004560 Alkaloid 8HGO low borderline 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig26G0005040 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig26G0005080 Alkaloid 8HGO low borderline 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig26G0007280 Alkaloid 8HGO medium pass 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig26G0007660 Alkaloid 8HGO low borderline 8HGO__00001__sp_W8JWV8_8HGO_CATRO
Pnig26G0007690 Alkaloid 8HGO low borderline 8HGO__00001__sp_W8JWV8_8HGO_CATRO