PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status Best Target
Pnig01G0005070 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig01G0005120 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig01G0005290 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig01G0005330 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig01G0010810 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig01G0010840 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig01G0010850 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig01G0010870 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig01G0010890 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig01G0012790 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig01G0012810 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig01G0012820 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig01G0012830 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig01G0017240 Flavonoid UFGT low borderline UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig01G0017320 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig01G0018320 Flavonoid UFGT medium pass UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig01G0020580 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig01G0020600 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig01G0023780 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig01G0023790 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig01G0035430 Flavonoid UFGT medium pass UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig01G0035910 Flavonoid UFGT medium pass UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig02G0003830 Flavonoid UFGT medium pass UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig02G0004060 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig02G0004120 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig02G0021930 Flavonoid UFGT low borderline UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig02G0021980 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig02G0022000 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig02G0022010 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig02G0022020 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig02G0023860 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig03G0004950 Flavonoid UFGT medium pass UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig03G0004970 Flavonoid UFGT medium pass UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig03G0005010 Flavonoid UFGT medium pass UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig03G0005040 Flavonoid UFGT medium pass UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig03G0009480 Flavonoid UFGT low borderline UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig03G0009490 Flavonoid UFGT medium pass UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig03G0009510 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig03G0009520 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig03G0009530 Flavonoid UFGT low borderline UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig03G0009540 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig03G0009550 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig03G0019930 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig03G0023150 Flavonoid UFGT low borderline UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig03G0023840 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig04G0015880 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig04G0015900 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig04G0023280 Flavonoid UFGT medium pass UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig04G0027110 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig04G0027120 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI