PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP80B1
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Gene Pathway Family Confidence Status Best Target
Pnig01G0013130 Alkaloid CYP80B1 low borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0001680 Alkaloid CYP80B1 low borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0001700 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0005330 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0005350 Alkaloid CYP80B1 medium pass CYP80B1__00002__sp_O64900_C80B2_ESCCA
Pnig02G0005360 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0005380 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0005390 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0006330 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0006340 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0006370 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0006380 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0006400 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0006410 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0006440 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0008670 Alkaloid CYP80B1 low borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig02G0040520 Alkaloid CYP80B1 low borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig03G0012550 Alkaloid CYP80B1 low borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig06G0019900 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig08G0017250 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig08G0017270 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig08G0017280 Alkaloid CYP80B1 medium pass CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig08G0019530 Alkaloid CYP80B1 medium pass CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig08G0019560 Alkaloid CYP80B1 medium pass CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig08G0019620 Alkaloid CYP80B1 medium pass CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig08G0019640 Alkaloid CYP80B1 medium pass CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig08G0019660 Alkaloid CYP80B1 medium pass CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig11G0013180 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig16G0020200 Alkaloid CYP80B1 medium borderline CYP80B1__00002__sp_O64900_C80B2_ESCCA
Pnig17G0001360 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig17G0005200 Alkaloid CYP80B1 medium pass CYP80B1__00002__sp_O64900_C80B2_ESCCA
Pnig19G0007610 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig19G0019240 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig20G0004110 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig20G0004120 Alkaloid CYP80B1 medium borderline CYP80B1__00002__sp_O64900_C80B2_ESCCA
Pnig20G0004130 Alkaloid CYP80B1 low borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
Pnig20G0007230 Alkaloid CYP80B1 medium pass CYP80B1__00002__sp_O64900_C80B2_ESCCA
Pnig20G0007240 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA
PnigPn350000180 Alkaloid CYP80B1 medium borderline CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA