PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
Reset
Gene Pathway Family Confidence Status Best Target
Pnig03G0010440 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig04G0033030 Alkaloid SLS medium pass SLS__00001__sp_Q05047_SLS1_CATRO
Pnig05G0029360 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig05G0029440 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig05G0029470 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig05G0029510 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig05G0029540 Alkaloid SLS medium pass SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig05G0029610 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig05G0029700 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig05G0029750 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig05G0029810 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig05G0029840 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig05G0029860 Alkaloid SLS low borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig05G0032670 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig05G0032750 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig05G0032870 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig05G0032900 Alkaloid SLS medium pass SLS__00001__sp_Q05047_SLS1_CATRO
Pnig06G0014690 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig06G0014700 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig06G0015270 Alkaloid SLS low borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig07G0005940 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig07G0005950 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig07G0031310 Alkaloid SLS low borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig08G0023020 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig08G0024270 Alkaloid SLS low borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig09G0008650 Alkaloid SLS low borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig10G0015810 Alkaloid SLS low borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig11G0012140 Alkaloid SLS medium pass SLS__00001__sp_Q05047_SLS1_CATRO
Pnig14G0011510 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig14G0018670 Alkaloid SLS medium pass SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig14G0018880 Alkaloid SLS medium pass SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig15G0015080 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig16G0011040 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig16G0011110 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig16G0011170 Alkaloid SLS medium pass SLS__00001__sp_Q05047_SLS1_CATRO
Pnig16G0011210 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig16G0011250 Alkaloid SLS medium pass SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig16G0011300 Alkaloid SLS medium pass SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig16G0011340 Alkaloid SLS medium pass SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig17G0013550 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig18G0012250 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig19G0010500 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig20G0000680 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig22G0009260 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig24G0008320 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig24G0008350 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Pnig24G0008360 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Pnig24G0008370 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO