PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status Best Target
Pnig01G0003020 Alkaloid PYKS medium pass PYKS__00001__tr_A0A5J6BTX3_A0A5J6BTX3_DATST
Pnig01G0020120 Alkaloid PYKS medium pass PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig03G0000720 Alkaloid PYKS medium pass PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig03G0000730 Alkaloid PYKS low borderline PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig03G0000750 Alkaloid PYKS medium pass PYKS__00001__tr_A0A5J6BTX3_A0A5J6BTX3_DATST
Pnig03G0000760 Alkaloid PYKS medium pass PYKS__00001__tr_A0A5J6BTX3_A0A5J6BTX3_DATST
Pnig03G0000770 Alkaloid PYKS medium pass PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig03G0000780 Alkaloid PYKS medium pass PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig03G0000820 Alkaloid PYKS medium pass PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig03G0001470 Alkaloid PYKS medium pass PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig07G0030310 Alkaloid PYKS medium pass PYKS__00001__tr_A0A5J6BTX3_A0A5J6BTX3_DATST
Pnig12G0001800 Alkaloid PYKS medium pass PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig15G0025230 Alkaloid PYKS medium pass PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig15G0025250 Alkaloid PYKS medium pass PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig15G0025700 Alkaloid PYKS medium pass PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig15G0025710 Alkaloid PYKS medium pass PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig16G0020170 Alkaloid PYKS medium pass PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig17G0005250 Alkaloid PYKS medium pass PYKS__00002__tr_A0A5J6BTZ3_A0A5J6BTZ3_9SOLA
Pnig21G0013320 Alkaloid PYKS medium pass PYKS__00001__tr_A0A5J6BTX3_A0A5J6BTX3_DATST