PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status Best Target
Pnig01G0015620 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig01G0015630 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig01G0015670 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Pnig01G0025100 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Pnig01G0033350 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig01G0034070 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig02G0007720 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig02G0008160 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig02G0009630 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig04G0005710 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig04G0009260 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig04G0009310 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig04G0016800 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig04G0017110 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig05G0010410 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Pnig05G0010670 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Pnig05G0014290 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig05G0014300 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig05G0014320 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig05G0022760 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig05G0022830 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Pnig05G0022850 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig05G0029090 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig05G0032400 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig06G0003590 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig07G0004770 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig07G0023530 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig07G0023540 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig07G0023550 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Pnig07G0029260 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig07G0033210 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig10G0019060 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig11G0001610 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig11G0001720 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig11G0006030 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig12G0008550 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig13G0010190 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Pnig14G0005070 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig14G0005080 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig14G0005100 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig14G0005120 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig14G0005130 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig14G0005150 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig14G0005170 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig14G0011030 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Pnig14G0011060 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Pnig19G0007410 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Pnig21G0005530 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Pnig22G0004000 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Pnig22G0006710 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC