PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status Best Target
Pnig01G0013080 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig01G0013090 Alkaloid G8O/G8H low borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig01G0013100 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig01G0018760 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig01G0018780 Alkaloid G8O/G8H medium pass G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
Pnig01G0018790 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig01G0018810 Alkaloid G8O/G8H low borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig01G0018920 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig01G0018930 Alkaloid G8O/G8H medium pass G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
Pnig01G0018940 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig01G0018980 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig01G0030250 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig01G0031430 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig01G0031440 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig01G0031650 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig02G0009520 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig02G0015950 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig02G0021950 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig03G0006020 Alkaloid G8O/G8H medium borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
Pnig03G0006280 Alkaloid G8O/G8H medium borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
Pnig03G0012400 Alkaloid G8O/G8H low borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig03G0019690 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig03G0019700 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig03G0023590 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig03G0023600 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig03G0024080 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig03G0024120 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig03G0024130 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig03G0024450 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig03G0024490 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig03G0029790 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig04G0024350 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig04G0026360 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig04G0026370 Alkaloid G8O/G8H low borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig05G0015790 Alkaloid G8O/G8H low borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig05G0033380 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig05G0033420 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig05G0033430 Alkaloid G8O/G8H medium pass G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig06G0017250 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig07G0031330 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig08G0002100 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig08G0010030 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig08G0017140 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig08G0025480 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig09G0022640 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig09G0022650 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig09G0022670 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig09G0022700 Alkaloid G8O/G8H low borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig09G0022720 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig09G0022960 Alkaloid G8O/G8H medium borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN