PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status Best Target
Pnig02G0007620 Alkaloid BBE medium borderline BBE__00001__sp_A7WPL6_BBLB_TOBAC
Pnig02G0014490 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pnig02G0014500 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pnig02G0014510 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pnig02G0020850 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pnig02G0020860 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
Pnig02G0020870 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pnig02G0029290 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pnig02G0029300 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
Pnig02G0029310 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pnig04G0019070 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pnig04G0019080 Alkaloid BBE low borderline BBE__00004__sp_O64743_BBE15_ARATH
Pnig07G0018690 Alkaloid BBE medium borderline BBE__00003__sp_F1T161_BBLC1_TOBAC
Pnig08G0000280 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pnig08G0000290 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pnig08G0000300 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
Pnig08G0001220 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pnig08G0001230 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pnig08G0001240 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
Pnig08G0018390 Alkaloid BBE low borderline BBE__00002__sp_F1T160_BBLA_TOBAC
Pnig08G0024030 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pnig08G0024040 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pnig08G0024050 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pnig08G0024060 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pnig08G0024080 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
Pnig08G0024090 Alkaloid BBE low borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
Pnig08G0024100 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pnig12G0016150 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
Pnig12G0016170 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pnig12G0016180 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
Pnig12G0016190 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pnig12G0017260 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pnig12G0017290 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
Pnig22G0005500 Alkaloid BBE medium borderline BBE__00003__sp_F1T161_BBLC1_TOBAC