PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HMGR
Reset
Gene Pathway Family Confidence Status Best Target
Pnig01G0016010 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig01G0022410 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig02G0015130 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig03G0013300 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig04G0026080 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig05G0027130 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig05G0030840 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig05G0031160 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig05G0034460 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig06G0009460 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig06G0011600 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig06G0013280 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig06G0015540 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig06G0015550 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig06G0015920 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig08G0008310 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig08G0009160 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig09G0013120 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig09G0013130 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig10G0005260 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig10G0013480 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig11G0015630 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig11G0015640 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig13G0014790 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig13G0014800 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig14G0007830 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig14G0008820 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig14G0009450 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig15G0011810 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig15G0015040 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig16G0006550 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig17G0006690 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig17G0006800 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig17G0006920 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig19G0018700 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig20G0012230 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig21G0006830 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig22G0007410 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig23G0000270 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig26G0007450 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI